PDB: 1gx5 Compound: RNA-directed RNA polymerase Classification: TRANSFERASE Entry date in PDB: 2002-04-09 Resolution [Å]: 1.70 R-Factor: 0.193

CHAIN: A SWISS-PROT/TREMBL: P26663    KEYWORD: 3D-structure    ATP-binding    Coat protein    Core protein    Envelope protein    Glycoprotein    Helicase    Hydrolase    Nonstructural protein    Polyprotein    RNA-directed RNA polymerase    Serine protease    Transferase    Transmembrane    EC: 2.7.7.48 SCOP: e.8.1.4 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    RNA-dependent RNA-polymerase    Viral RNA polymerase    Hepatitis C virus GO:  viral capsid    viral envelope    ATP binding    ATP-dependent helicase activity    helicase activity    nucleic acid binding    RNA binding    RNA-directed RNA polymerase activity    serine-type peptidase activity    structural molecule activity    proteolysis and peptidolysis    transcription    viral genome replication    viral transformation

Image Source: PDB

Loops in ArchDB40 clusters

1gx5_A_443 - HA => SUBCLASS : 2.1.1
1gx5_A_264 - HA => SUBCLASS : 3.1.1
1gx5_A_369 - HA => SUBCLASS : 3.1.1
1gx5_A_369 - HA => SUBCLASS : 4.2.2
1gx5_A_369 - HA => SUBCLASS : 5.1.3
1gx5_A_450 - EH => SUBCLASS : 1.1.7
1gx5_A_450 - EH => SUBCLASS : 1.1.16
1gx5_A_380 - EH => SUBCLASS : 1.1.19
1gx5_A_224 - HH => SUBCLASS : 2.1.1
1gx5_A_105 - HH => SUBCLASS : 2.2.3

Loops in ArchDB95 clusters

1gx5_A_450 - EH => SUBCLASS : 1.1.12
1gx5_A_450 - EH => SUBCLASS : 1.1.41
1gx5_A_224 - HH => SUBCLASS : 2.1.1
1gx5_A_105 - HH => SUBCLASS : 2.2.4
1gx5_A_443 - HA => SUBCLASS : 2.1.1
1gx5_A_264 - HA => SUBCLASS : 3.1.1
1gx5_A_369 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1gx5_A_105 - HH => SUBCLASS : 2.2.14

Loops not clustered in ArchDB

1gx5_A_136 - AR
1gx5_A_136 - AR
1gx5_A_4 - EH
1gx5_A_38 - EH
1gx5_A_144 - EH
1gx5_A_217 - EH
1gx5_A_273 - EH
1gx5_A_319 - EH
1gx5_A_315 - HA
1gx5_A_264 - HA
1gx5_A_315 - HA
1gx5_A_369 - HA
1gx5_A_443 - HA
1gx5_A_247 - HE
1gx5_A_25 - HE
1gx5_A_113 - HE
1gx5_A_428 - HE
1gx5_A_197 - HE
1gx5_A_287 - HE
1gx5_A_329 - HE
1gx5_A_497 - HH
1gx5_A_45 - HH
1gx5_A_479 - HH
1gx5_A_459 - HH
1gx5_A_407 - HH
1gx5_A_389 - HH
1gx5_A_230 - HH
1gx5_A_182 - HH
1gx5_A_176 - HH
1gx5_A_85 - HH
1gx5_A_62 - HH
1gx5_A_165 - HH

1c2p A - percentage of sequence identity: 99
1c2p B - percentage of sequence identity: 99
1csj A - percentage of sequence identity: 99
1csj B - percentage of sequence identity: 99
1gx6 A - percentage of sequence identity: 100
1nb4 B - percentage of sequence identity: 95
1nb6 A - percentage of sequence identity: 95
1nb6 B - percentage of sequence identity: 95
1nb7 A - percentage of sequence identity: 95
1nb7 B - percentage of sequence identity: 95
1nhu A - percentage of sequence identity: 100
1nhu B - percentage of sequence identity: 100
1nhv A - percentage of sequence identity: 100
1nhv B - percentage of sequence identity: 100
1os5 A - percentage of sequence identity: 99
1quv A - percentage of sequence identity: 100
1yuy A - percentage of sequence identity: 75
1yv2 A - percentage of sequence identity: 75
1yvf A - percentage of sequence identity: 96
1yvx A - percentage of sequence identity: 75
1yvz A - percentage of sequence identity: 75
1z4u A - percentage of sequence identity: 96
2awz A - percentage of sequence identity: 99
2awz B - percentage of sequence identity: 99
2ax0 A - percentage of sequence identity: 99
2ax0 B - percentage of sequence identity: 99
2ax1 A - percentage of sequence identity: 99
2ax1 B - percentage of sequence identity: 99
2brk A - percentage of sequence identity: 100
2brl A - percentage of sequence identity: 100