PDB: 1hrd Compound: glutamate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 1997-03-12 Resolution [Å]: 1.96 R-Factor: 0.172

CHAIN: A SWISS-PROT/TREMBL: P24295    KEYWORD: 3D-structure    NAD    Oxidoreductase    EC: 1.4.1.2 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Clostridium symbiosum SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Clostridium symbiosum GO:  oxidoreductase activity    amino acid metabolism    CHAIN: B SWISS-PROT/TREMBL: P24295    KEYWORD: 3D-structure    NAD    Oxidoreductase    EC: 1.4.1.2 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Clostridium symbiosum SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Clostridium symbiosum GO:  oxidoreductase activity    amino acid metabolism    CHAIN: C SWISS-PROT/TREMBL: P24295    KEYWORD: 3D-structure    NAD    Oxidoreductase    EC: 1.4.1.2 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Clostridium symbiosum SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Clostridium symbiosum GO:  oxidoreductase activity    amino acid metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1hrd_A_255 - HA => SUBCLASS : 2.2.2
1hrd_A_56 - HA => SUBCLASS : 4.2.2
1hrd_A_56 - HA => SUBCLASS : 5.1.5
1hrd_A_365 - EH => SUBCLASS : 1.1.1
1hrd_A_232 - EH => SUBCLASS : 3.2.4
1hrd_A_88 - EH => SUBCLASS : 5.1.1
1hrd_A_160 - EH => SUBCLASS : 6.44.1
1hrd_A_341 - EH => SUBCLASS : 8.11.1
1hrd_A_33 - HH => SUBCLASS : 1.2.6
1hrd_A_33 - HH => SUBCLASS : 1.2.9
1hrd_A_2 - HH => SUBCLASS : 1.2.17
1hrd_A_40 - HH => SUBCLASS : 1.3.1
1hrd_A_375 - HH => SUBCLASS : 5.1.1

Loops in ArchDB95 clusters

1hrd_A_365 - EH => SUBCLASS : 1.1.2
1hrd_A_365 - EH => SUBCLASS : 1.1.17
1hrd_A_88 - EH => SUBCLASS : 5.1.1
1hrd_A_160 - EH => SUBCLASS : 6.74.1
1hrd_A_341 - EH => SUBCLASS : 8.18.1
1hrd_A_33 - HH => SUBCLASS : 1.2.3
1hrd_A_2 - HH => SUBCLASS : 1.2.7
1hrd_A_40 - HH => SUBCLASS : 1.3.1
1hrd_A_375 - HH => SUBCLASS : 5.1.1
1hrd_A_293 - HE => SUBCLASS : 2.1.1
1hrd_A_240 - HE => SUBCLASS : 2.5.2
1hrd_A_100 - HE => SUBCLASS : 3.2.8
1hrd_A_328 - HE => SUBCLASS : 3.3.2
1hrd_A_352 - HE => SUBCLASS : 3.4.1
1hrd_A_47 - HE => SUBCLASS : 3.25.1
1hrd_A_208 - HE => SUBCLASS : 7.13.1
1hrd_A_255 - HA => SUBCLASS : 2.2.2
1hrd_A_56 - HA => SUBCLASS : 5.1.4
1hrd_A_56 - HA => SUBCLASS : 5.1.5

Loops not clustered in ArchDB

1hrd_A_71 - AR
1hrd_A_302 - AR
1hrd_A_123 - EH
1hrd_A_264 - EH
1hrd_A_316 - EH
1hrd_A_137 - HE
1hrd_A_19 - HH
1hrd_A_170 - HH
1hrd_A_275 - HH
1hrd_A_369 - HH
1hrd_A_395 - HH

1aup - - percentage of sequence identity: 99
1bgv A - percentage of sequence identity: 100
1hrd A - percentage of sequence identity: 100
1hrd B - percentage of sequence identity: 100
1hrd C - percentage of sequence identity: 100
1k89 - - percentage of sequence identity: 99