PDB: 1ifr Compound: lamin aC Classification: IMMUNE SYSTEM Entry date in PDB: 2002-07-17 Resolution [Å]: 1.40 R-Factor: 0.216

CHAIN: A SWISS-PROT/TREMBL: P02545    KEYWORD: 3D-structure    Alternative splicing    Cardiomyopathy    Charcot-Marie-Tooth disease    Coiled coil    Disease mutation    Intermediate filament    Lipoprotein    Nuclear protein    Phosphorylation    Prenylation    3D-structure    Alternative splicing    Cardiomyopathy    Charcot-Marie-Tooth disease    Coiled coil    Disease mutation    Intermediate filament    Lipoprotein    Nuclear protein    Phosphorylation    Prenylation    SCOP: b.1.16.1 All beta proteins    Immunoglobulin-like beta-sandwich    Lamin A/C globular tail domain    Lamin A/C globular tail domain    Lamin A/C globular tail domain    Human (Homo sapiens) GO:  structural molecule activity

Image Source: PDB

Loops in ArchDB40 clusters

1ifr_A_526 - HA => SUBCLASS : 4.2.2
1ifr_A_488 - AR => SUBCLASS : 3.1.1
1ifr_A_451 - AR => SUBCLASS : 5.6.1

Loops in ArchDB95 clusters

1ifr_A_488 - AR => SUBCLASS : 1.1.1
1ifr_A_479 - AR => SUBCLASS : 2.1.8
1ifr_A_451 - AR => SUBCLASS : 3.9.1
1ifr_A_451 - AR => SUBCLASS : 5.1.1
1ifr_A_526 - HA => SUBCLASS : 3.1.2
1ifr_A_526 - HA => SUBCLASS : 5.1.1
1ifr_A_526 - HA => SUBCLASS : 5.1.2
1ifr_A_468 - HA => SUBCLASS : 5.13.1

Loops not clustered in ArchDB

1ifr_A_433 - AR
1ifr_A_462 - AR
1ifr_A_511 - AR
1ifr_A_440 - HA
1ifr_A_494 - HA

1ivt A - percentage of sequence identity: 100
1ufg A - percentage of sequence identity: 96