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Information on 1iqa
PDB: 1iqa
Compound: receptor activator of nuclear factor kappa b ligan
Classification: CYTOKINE
Entry date in PDB: 2002-03-13
Resolution [Å]: 2.20
R-Factor: 0.226


CHAIN: A
SWISS-PROT/TREMBL: O35235
   KEYWORD: 3D-structure    Alternative splicing    Cytokine    Differentiation    Glycoprotein    Receptor    Signal-anchor    Transmembrane   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    TRANCE/RANKL cytokine    Mouse (Mus musculus)
GO:  membrane    tumor necrosis factor receptor binding    immune response   


CHAIN: B
SWISS-PROT/TREMBL: O35235
   KEYWORD: 3D-structure    Alternative splicing    Cytokine    Differentiation    Glycoprotein    Receptor    Signal-anchor    Transmembrane   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    TRANCE/RANKL cytokine    Mouse (Mus musculus)
GO:  membrane    tumor necrosis factor receptor binding    immune response   


CHAIN: C
SWISS-PROT/TREMBL: O35235
   KEYWORD: 3D-structure    Alternative splicing    Cytokine    Differentiation    Glycoprotein    Receptor    Signal-anchor    Transmembrane   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    TRANCE/RANKL cytokine    Mouse (Mus musculus)
GO:  membrane    tumor necrosis factor receptor binding    immune response   
1iqa Image
Image Source: PDB

Stored Loops of 1iqa

Loops in ArchDB40 clusters

1iqa_A_240 - HA => SUBCLASS : 6.8.1
1iqa_A_181 - AR => SUBCLASS : 1.1.14

Loops in ArchDB95 clusters

1iqa_A_181 - AR => SUBCLASS : 2.1.6
1iqa_A_240 - HA => SUBCLASS : 6.9.1

Loops not clustered in ArchDB

1iqa_A_164 - AR
1iqa_A_269 - AR
1iqa_A_260 - AR
1iqa_A_252 - AR
1iqa_A_234 - AR
1iqa_A_211 - AR
1iqa_A_204 - AR
1iqa_A_194 - AR
1iqa_A_186 - AR
1iqa_A_286 - AR
1iqa_A_200 - HA

Homologous structures to 1iqa classified in ArchDB

1iqa A - percentage of sequence identity: 100
1iqa B - percentage of sequence identity: 100
1iqa C - percentage of sequence identity: 100
1jtz X - percentage of sequence identity: 100
1jtz Y - percentage of sequence identity: 100
1jtz Z - percentage of sequence identity: 100
1s55 A - percentage of sequence identity: 100
1s55 B - percentage of sequence identity: 100
1s55 C - percentage of sequence identity: 100