PDB: 1iz5 Compound: proliferating cell nuclear antigen Classification: DNA BINDING PROTEIN Entry date in PDB: 2003-04-01 Resolution [Å]: 1.80 R-Factor: 0.273

CHAIN: A SWISS-PROT/TREMBL: O73947    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-binding    SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    Proliferating cell nuclear antigen (PCNA)    Archaeon Pyrococcus furiosus SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    Proliferating cell nuclear antigen (PCNA)    Archaeon Pyrococcus furiosus GO:  delta-DNA polymerase cofactor complex    nucleus    DNA binding    DNA polymerase processivity factor activity    regulation of DNA replication    CHAIN: B SWISS-PROT/TREMBL: O73947    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-binding    SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    Proliferating cell nuclear antigen (PCNA)    Archaeon Pyrococcus furiosus SCOP: d.131.1.2 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase processivity factor    Proliferating cell nuclear antigen (PCNA)    Archaeon Pyrococcus furiosus GO:  delta-DNA polymerase cofactor complex    nucleus    DNA binding    DNA polymerase processivity factor activity    regulation of DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1iz5_A_138 - HE => SUBCLASS : 2.5.3
1iz5_A_201 - HE => SUBCLASS : 5.1.3
1iz5_A_73 - HE => SUBCLASS : 5.1.3
1iz5_A_163 - HA => SUBCLASS : 2.2.1
1iz5_A_26 - HA => SUBCLASS : 2.2.6
1iz5_A_154 - HA => SUBCLASS : 2.6.1
1iz5_A_227 - HA => SUBCLASS : 3.5.1
1iz5_A_216 - HA => SUBCLASS : 3.7.1
1iz5_A_35 - HA => SUBCLASS : 5.2.1
1iz5_A_188 - AR => SUBCLASS : 3.2.4
1iz5_A_60 - AR => SUBCLASS : 3.2.7
1iz5_A_47 - AR => SUBCLASS : 5.12.2

Loops in ArchDB95 clusters

1iz5_A_60 - AR => SUBCLASS : 3.1.1
1iz5_A_60 - AR => SUBCLASS : 3.1.8
1iz5_A_188 - AR => SUBCLASS : 3.1.9
1iz5_A_47 - AR => SUBCLASS : 5.5.3
1iz5_A_10 - HE => SUBCLASS : 2.3.3
1iz5_A_138 - HE => SUBCLASS : 2.3.3
1iz5_A_73 - HE => SUBCLASS : 5.1.3
1iz5_A_201 - HE => SUBCLASS : 5.1.3
1iz5_A_163 - HA => SUBCLASS : 2.2.1
1iz5_A_26 - HA => SUBCLASS : 2.2.7
1iz5_A_154 - HA => SUBCLASS : 2.4.1
1iz5_A_227 - HA => SUBCLASS : 3.7.1
1iz5_A_88 - HA => SUBCLASS : 4.43.1
1iz5_A_35 - HA => SUBCLASS : 5.2.1
1iz5_A_216 - HA => SUBCLASS : 5.3.1

Loops not clustered in ArchDB

1iz5_A_108 - AR
1iz5_A_174 - AR
1iz5_A_3 - EH
1iz5_A_67 - EH
1iz5_A_132 - EH
1iz5_A_195 - EH
1iz5_A_98 - HA

1ge8 A - percentage of sequence identity: 99
1isq A - percentage of sequence identity: 99
1iz4 A - percentage of sequence identity: 99
1iz5 A - percentage of sequence identity: 100
1iz5 B - percentage of sequence identity: 100