PDB: 1jcl Compound: deoxyribose-phosphate aldolase Classification: LYASE Entry date in PDB: 2001-10-31 Resolution [Å]: 1.05 R-Factor: 0.143

CHAIN: A SWISS-PROT/TREMBL: P00882    KEYWORD: 3D-structure    Complete proteome    Lyase    Schiff base    EC: 4.1.2.4 SCOP: c.1.10.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I aldolase    Deoxyribose-phosphate aldolase DeoC    Escherichia coli GO:  cytoplasm    deoxyribose-phosphate aldolase activity    lyase activity    deoxyribonucleotide catabolism    CHAIN: B SWISS-PROT/TREMBL: P00882    KEYWORD: 3D-structure    Complete proteome    Lyase    Schiff base    EC: 4.1.2.4 SCOP: c.1.10.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I aldolase    Deoxyribose-phosphate aldolase DeoC    Escherichia coli GO:  cytoplasm    deoxyribose-phosphate aldolase activity    lyase activity    deoxyribonucleotide catabolism

Image Source: PDB

Loops in ArchDB40 clusters

1jcl_A_37 - HA => SUBCLASS : 2.2.2
1jcl_A_45 - EH => SUBCLASS : 1.1.10
1jcl_A_235 - EH => SUBCLASS : 1.3.2
1jcl_A_15 - EH => SUBCLASS : 4.6.1
1jcl_A_15 - EH => SUBCLASS : 4.47.1
1jcl_A_41 - AR => SUBCLASS : 2.1.12
1jcl_A_107 - HH => SUBCLASS : 2.2.2
1jcl_A_107 - HH => SUBCLASS : 2.2.10
1jcl_A_142 - HH => SUBCLASS : 2.17.1

Loops in ArchDB95 clusters

1jcl_A_45 - EH => SUBCLASS : 1.1.10
1jcl_A_15 - EH => SUBCLASS : 4.2.8
1jcl_A_15 - EH => SUBCLASS : 4.55.1
1jcl_A_41 - AR => SUBCLASS : 2.1.12
1jcl_A_107 - HH => SUBCLASS : 2.2.2
1jcl_A_107 - HH => SUBCLASS : 2.2.9
1jcl_A_142 - HH => SUBCLASS : 2.15.1
1jcl_A_37 - HA => SUBCLASS : 2.2.2

Loops in ArchDB-EC clusters

1jcl_A_142 - HH => SUBCLASS : 2.8.2

Loops not clustered in ArchDB

1jcl_A_41 - AR
1jcl_A_69 - EH
1jcl_A_199 - EH
1jcl_A_165 - EH
1jcl_A_135 - EH
1jcl_A_100 - EH
1jcl_A_37 - HA
1jcl_A_209 - HE
1jcl_A_179 - HE
1jcl_A_148 - HE
1jcl_A_116 - HE
1jcl_A_83 - HE
1jcl_A_26 - HE
1jcl_A_3 - HE
1jcl_A_53 - HE

1jcj A - percentage of sequence identity: 99
1jcj B - percentage of sequence identity: 99
1jcl A - percentage of sequence identity: 100
1jcl B - percentage of sequence identity: 100
1ktn A - percentage of sequence identity: 100
1ktn B - percentage of sequence identity: 100
1p1x A - percentage of sequence identity: 100
1p1x B - percentage of sequence identity: 100