PDB: 1jf9 Compound: selenocysteine lyase Classification: LYASE Entry date in PDB: 2001-07-04 Resolution [Å]: 2.00 R-Factor: 0.178

CHAIN: A SWISS-PROT/TREMBL: P77444    KEYWORD: 3D-structure    Complete proteome    Lyase    Pyridoxal phosphate    EC: 4.4.1.16 SCOP: c.67.1.3 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    Cystathionine synthase-like    NifS-like protein/selenocysteine lyase    Escherichia coli GO:  cysteine desulfurase activity    pyridoxal phosphate binding    transaminase activity    cysteine metabolism    metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1jf9_A_128 - HE => SUBCLASS : 1.1.1
1jf9_A_183 - HE => SUBCLASS : 1.1.1
1jf9_A_128 - HE => SUBCLASS : 1.1.2
1jf9_A_344 - HE => SUBCLASS : 1.1.3
1jf9_A_183 - HE => SUBCLASS : 1.1.7
1jf9_A_128 - HE => SUBCLASS : 2.1.1
1jf9_A_212 - HE => SUBCLASS : 3.1.2
1jf9_A_366 - HE => SUBCLASS : 3.1.3
1jf9_A_212 - HE => SUBCLASS : 3.1.3
1jf9_A_299 - HE => SUBCLASS : 3.18.1
1jf9_A_299 - HE => SUBCLASS : 3.19.1
1jf9_A_157 - HE => SUBCLASS : 4.8.1
1jf9_A_94 - HE => SUBCLASS : 5.2.1
1jf9_A_18 - HA => SUBCLASS : 2.1.1
1jf9_A_256 - HA => SUBCLASS : 4.23.1
1jf9_A_219 - HA => SUBCLASS : 9.6.1
1jf9_A_234 - EH => SUBCLASS : 1.1.1
1jf9_A_88 - EH => SUBCLASS : 2.7.3
1jf9_A_377 - EH => SUBCLASS : 5.1.2
1jf9_A_25 - EH => SUBCLASS : 10.2.1

Loops in ArchDB95 clusters

1jf9_A_234 - EH => SUBCLASS : 1.1.17
1jf9_A_88 - EH => SUBCLASS : 2.7.3
1jf9_A_334 - EH => SUBCLASS : 4.40.2
1jf9_A_25 - EH => SUBCLASS : 10.5.1
1jf9_A_128 - HE => SUBCLASS : 1.1.1
1jf9_A_183 - HE => SUBCLASS : 1.1.1
1jf9_A_344 - HE => SUBCLASS : 1.2.1
1jf9_A_128 - HE => SUBCLASS : 2.1.1
1jf9_A_128 - HE => SUBCLASS : 2.1.2
1jf9_A_366 - HE => SUBCLASS : 3.3.1
1jf9_A_212 - HE => SUBCLASS : 3.3.1
1jf9_A_299 - HE => SUBCLASS : 3.7.2
1jf9_A_299 - HE => SUBCLASS : 3.10.2
1jf9_A_94 - HE => SUBCLASS : 5.4.1
1jf9_A_18 - HA => SUBCLASS : 2.1.1
1jf9_A_219 - HA => SUBCLASS : 9.18.1

Loops in ArchDB-EC clusters

1jf9_A_94 - HE => SUBCLASS : 5.1.1

Loops not clustered in ArchDB

1jf9_A_356 - AR
1jf9_A_22 - AR
1jf9_A_356 - AR
1jf9_A_22 - AR
1jf9_A_115 - EH
1jf9_A_359 - EH
1jf9_A_165 - EH
1jf9_A_266 - EH
1jf9_A_196 - EH
1jf9_A_140 - EH
1jf9_A_323 - HA
1jf9_A_256 - HA
1jf9_A_219 - HA
1jf9_A_323 - HA
1jf9_A_18 - HA
1jf9_A_5 - HE
1jf9_A_240 - HE
1jf9_A_60 - HE
1jf9_A_37 - HH
1jf9_A_281 - HH

1c0n A - percentage of sequence identity: 98
1i29 A - percentage of sequence identity: 100
1kmj A - percentage of sequence identity: 100
1kmk A - percentage of sequence identity: 100