PDB: 1jl5 Compound: outer protein yopm Classification: TOXIN Entry date in PDB: 2001-10-10 Resolution [Å]: 2.10 R-Factor: 0.220

CHAIN: A SWISS-PROT/TREMBL: P17778    KEYWORD: 3D-structure    Antigen    Complete proteome    Leucine-rich repeat    Outer membrane    Plasmid    Repeat    SCOP: c.10.2.6 Alpha and beta proteins (a/b)    Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)    L domain-like    Leucine rich effector protein YopM    Leucine rich effector protein YopM    Yersinia pestis GO:

Image Source: PDB

Loops in ArchDB40 clusters

1jl5_A_1281 - AR => SUBCLASS : 5.35.1

Loops in ArchDB95 clusters

1jl5_A_1281 - AR => SUBCLASS : 5.49.1
1jl5_A_1058 - HE => SUBCLASS : 3.1.2

Loops not clustered in ArchDB

1jl5_A_1311 - AR
1jl5_A_1301 - AR
1jl5_A_1291 - AR
1jl5_A_1075 - HA
1jl5_A_1361 - HA
1jl5_A_1341 - HA
1jl5_A_1321 - HA
1jl5_A_1261 - HA
1jl5_A_1241 - HA
1jl5_A_1219 - HA
1jl5_A_1199 - HA
1jl5_A_1177 - HA
1jl5_A_1157 - HA
1jl5_A_1135 - HA
1jl5_A_1115 - HA
1jl5_A_1095 - HA
1jl5_A_1036 - HH

1g9u A - percentage of sequence identity: 100