PDB: 1jny Compound: elongation factor 1-alpha Classification: TRANSLATION Entry date in PDB: 2002-01-23 Resolution [Å]: 1.80 R-Factor: 0.220

CHAIN: A SWISS-PROT/TREMBL: P35021    KEYWORD: 3D-structure    Complete proteome    Elongation factor    GTP-binding    Protein biosynthesis    SCOP: b.43.3.1 All beta proteins    Reductase/isomerase/elongation factor common domain    Translation proteins    Elongation factors    Elongation factor eEF-1alpha, domain 2    Archaeon Sulfolobus solfataricus SCOP: b.44.1.1 All beta proteins    Elongation factor/aminomethyltransferase common domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    Elongation factor eEF-1alpha, C-terminal domain    Archaeon Sulfolobus solfataricus SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Elongation factor eEF-1alpha, N-terminal (G) domain    Archaeon Sulfolobus solfataricus GO:  cytoplasm    GTP binding    translation elongation factor activity    protein biosynthesis    translational elongation    CHAIN: B SWISS-PROT/TREMBL: P35021    KEYWORD: 3D-structure    Complete proteome    Elongation factor    GTP-binding    Protein biosynthesis    SCOP: b.43.3.1 All beta proteins    Reductase/isomerase/elongation factor common domain    Translation proteins    Elongation factors    Elongation factor eEF-1alpha, domain 2    Archaeon Sulfolobus solfataricus SCOP: b.44.1.1 All beta proteins    Elongation factor/aminomethyltransferase common domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain    Elongation factor eEF-1alpha, C-terminal domain    Archaeon Sulfolobus solfataricus SCOP: c.37.1.8 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    G proteins    Elongation factor eEF-1alpha, N-terminal (G) domain    Archaeon Sulfolobus solfataricus GO:  cytoplasm    GTP binding    translation elongation factor activity    protein biosynthesis    translational elongation

Image Source: PDB

Loops in ArchDB95 clusters

1jny_A_6 - EH => SUBCLASS : 5.5.2
1jny_A_284 - AR => SUBCLASS : 1.2.2
1jny_A_322 - AR => SUBCLASS : 1.2.22
1jny_A_288 - AR => SUBCLASS : 2.3.1
1jny_A_288 - AR => SUBCLASS : 2.3.2
1jny_A_385 - AR => SUBCLASS : 3.1.2
1jny_A_259 - AR => SUBCLASS : 3.3.1
1jny_A_259 - AR => SUBCLASS : 3.3.2
1jny_A_247 - AR => SUBCLASS : 4.28.1
1jny_A_294 - AR => SUBCLASS : 12.5.1
1jny_A_35 - HH => SUBCLASS : 2.5.1
1jny_A_409 - HA => SUBCLASS : 2.1.7
1jny_A_346 - HA => SUBCLASS : 2.3.21
1jny_A_272 - HA => SUBCLASS : 2.5.7
1jny_A_272 - HA => SUBCLASS : 2.5.9
1jny_A_78 - HA => SUBCLASS : 3.1.1
1jny_A_235 - HA => SUBCLASS : 3.8.1

Loops not clustered in ArchDB

1jny_A_312 - AR
1jny_A_325 - AR
1jny_A_372 - AR
1jny_A_396 - AR
1jny_A_148 - EH
1jny_A_188 - EH
1jny_A_85 - EH
1jny_A_110 - EH
1jny_A_264 - HA
1jny_A_352 - HA
1jny_A_52 - HE
1jny_A_97 - HE
1jny_A_131 - HE
1jny_A_163 - HE
1jny_A_215 - HE
1jny_A_19 - HH
1jny_A_121 - HH

1jny A - percentage of sequence identity: 100
1jny B - percentage of sequence identity: 100
1skq A - percentage of sequence identity: 100
1skq B - percentage of sequence identity: 100