PDB: 1jq6 Compound: assemblin Classification: HYDROLASE Entry date in PDB: 2001-09-12 Resolution [Å]: 2.30 R-Factor: 0.229

CHAIN: A SWISS-PROT/TREMBL: P16753    KEYWORD: 3D-structure    Capsid assembly    Coat protein    Hydrolase    Phosphorylation    Serine protease    EC: 3.4.21.97 SCOP: b.57.1.1 All beta proteins    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Herpes virus serine proteinase, assemblin    Human cytomegalovirus protease    Human cytomegalovirus GO:  serine-type endopeptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1jq6_A_64 - AR => SUBCLASS : 1.2.13
1jq6_A_177 - HH => SUBCLASS : 5.2.1
1jq6_A_74 - HA => SUBCLASS : 2.2.7

Loops in ArchDB-EC clusters

1jq6_A_177 - HH => SUBCLASS : 5.2.2

Loops not clustered in ArchDB

1jq6_A_158 - AR
1jq6_A_132 - AR
1jq6_A_64 - AR
1jq6_A_158 - AR
1jq6_A_132 - AR
1jq6_A_15 - EH
1jq6_A_172 - EH
1jq6_A_81 - EH
1jq6_A_58 - HA
1jq6_A_74 - HA
1jq6_A_58 - HA
1jq6_A_119 - HE
1jq6_A_36 - HE
1jq6_A_189 - HH
1jq6_A_91 - HH

1cmv B - percentage of sequence identity: 98
1id4 A - percentage of sequence identity: 99
1id4 B - percentage of sequence identity: 99
1iec A - percentage of sequence identity: 99
1iec B - percentage of sequence identity: 99
1ied B - percentage of sequence identity: 99
1ief A - percentage of sequence identity: 99
1ief B - percentage of sequence identity: 99
1ieg B - percentage of sequence identity: 98
1jq7 A - percentage of sequence identity: 100
1jq7 B - percentage of sequence identity: 100
1lay - - percentage of sequence identity: 99
1njt A - percentage of sequence identity: 99
1njt B - percentage of sequence identity: 99
1njt C - percentage of sequence identity: 99
1njt D - percentage of sequence identity: 99
1nju A - percentage of sequence identity: 99
1nju B - percentage of sequence identity: 99
1nju C - percentage of sequence identity: 99
1nju D - percentage of sequence identity: 99
1nkk A - percentage of sequence identity: 99
1nkk B - percentage of sequence identity: 99
1nkk C - percentage of sequence identity: 99
1nkk D - percentage of sequence identity: 99
1nkm A - percentage of sequence identity: 99
1nkm B - percentage of sequence identity: 99
1wpo A - percentage of sequence identity: 98
1wpo B - percentage of sequence identity: 98
2wpo A - percentage of sequence identity: 98
2wpo B - percentage of sequence identity: 98
2wpo C - percentage of sequence identity: 98
2wpo D - percentage of sequence identity: 98