PDB: 1jql Compound: DNA polymerase iii, beta chain Classification: TRANSFERASE Entry date in PDB: 2001-09-26 Resolution [Å]: 2.50 R-Factor: 0.249

CHAIN: A SWISS-PROT/TREMBL: P00583    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: d.131.1.1 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase III, beta subunit    DNA polymerase III, beta subunit    Escherichia coli SCOP: d.131.1.1 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase III, beta subunit    DNA polymerase III, beta subunit    Escherichia coli SCOP: d.131.1.1 Alpha and beta proteins (a+b)    DNA clamp    DNA clamp    DNA polymerase III, beta subunit    DNA polymerase III, beta subunit    Escherichia coli GO:  3'-5' exonuclease activity    3'-5' exonuclease activity    3'-5' exonuclease activity    DNA binding    DNA binding    DNA binding    DNA-directed DNA polymerase activity    DNA-directed DNA polymerase activity    DNA-directed DNA polymerase activity    DNA replication    DNA replication    DNA replication    CHAIN: B SWISS-PROT/TREMBL: P28630    KEYWORD: 3D-structure    Complete proteome    DNA replication    DNA-directed DNA polymerase    Transferase    EC: 2.7.7.7 SCOP: c.37.1.20 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Extended AAA-ATPase domain    delta subunit of DNA polymerase III, N-domain    Escherichia coli GO:  chromosome    delta DNA polymerase activity    DNA-directed DNA polymerase activity    DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1jql_B_93 - HE => SUBCLASS : 6.23.1
1jql_B_2 - EH => SUBCLASS : 1.1.16

Loops in ArchDB95 clusters

1jql_B_2 - EH => SUBCLASS : 1.1.10
1jql_B_2 - EH => SUBCLASS : 1.1.20
1jql_B_9 - HE => SUBCLASS : 4.8.1
1jql_B_93 - HE => SUBCLASS : 5.1.2
1jql_B_93 - HE => SUBCLASS : 6.15.1

Loops in ArchDB-EC clusters

1jql_B_93 - HE => SUBCLASS : 6.22.1

Loops not clustered in ArchDB

1jql_B_20 - EH
1jql_B_49 - EH
1jql_B_78 - EH
1jql_B_110 - EH
1jql_B_28 - HE
1jql_B_61 - HE
1jql_B_125 - HE

1jqj C - percentage of sequence identity: 100
1jqj D - percentage of sequence identity: 100
1jr3 D - percentage of sequence identity: 100
1xxh A - percentage of sequence identity: 100
1xxh F - percentage of sequence identity: 100
1xxi A - percentage of sequence identity: 100
1xxi F - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0