PDB: 1k0w Compound: l-ribulose 5 phosphate 4-epimerase Classification: ISOMERASE Entry date in PDB: 2003-01-28 Resolution [Å]: 2.10 R-Factor: 0.205

CHAIN: A SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism    CHAIN: B SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism    CHAIN: C SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism    CHAIN: D SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism    CHAIN: E SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism    CHAIN: F SWISS-PROT/TREMBL: P08203    KEYWORD: 3D-structure    Arabinose catabolism    Complete proteome    Isomerase    Zinc    EC: 5.1.3.4 SCOP: c.74.1.1 Alpha and beta proteins (a/b)    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    AraD-like aldolase/epimerase    L-ribulose-5-phosphate 4-epimerase    Escherichia coli GO:  L-ribulose-phosphate 4-epimerase activity    zinc ion binding    L-arabinose catabolism

Image Source: PDB

Loops in ArchDB40 clusters

1k0w_A_77 - HE => SUBCLASS : 5.10.1
1k0w_A_141 - HE => SUBCLASS : 8.2.1
1k0w_A_165 - HA => SUBCLASS : 3.6.1
1k0w_A_28 - HA => SUBCLASS : 4.1.1
1k0w_A_57 - HA => SUBCLASS : 4.1.2

Loops in ArchDB95 clusters

1k0w_A_77 - HE => SUBCLASS : 5.9.1
1k0w_A_165 - HA => SUBCLASS : 3.8.1
1k0w_A_28 - HA => SUBCLASS : 4.1.1
1k0w_A_57 - HA => SUBCLASS : 4.1.2

Loops in ArchDB-EC clusters

1k0w_A_77 - HE => SUBCLASS : 5.5.3

Loops not clustered in ArchDB

1k0w_A_66 - EH
1k0w_A_92 - EH
1k0w_A_172 - EH
1k0w_A_57 - HA
1k0w_A_38 - HA
1k0w_A_28 - HA
1k0w_A_38 - HA
1k0w_A_165 - HA
1k0w_A_3 - HE
1k0w_A_180 - HH
1k0w_A_116 - HH
1k0w_A_99 - HH
1k0w_A_134 - HH

1jdi A - percentage of sequence identity: 99
1jdi B - percentage of sequence identity: 99
1jdi C - percentage of sequence identity: 99
1jdi D - percentage of sequence identity: 99
1jdi E - percentage of sequence identity: 99
1jdi F - percentage of sequence identity: 99
1k0w A - percentage of sequence identity: 100
1k0w B - percentage of sequence identity: 100
1k0w C - percentage of sequence identity: 100
1k0w D - percentage of sequence identity: 100
1k0w E - percentage of sequence identity: 100
1k0w F - percentage of sequence identity: 100