PDB: 1k3b Compound: dipeptydil-peptidase i exclusion domain Classification: HYDROLASE Entry date in PDB: 2002-04-02 Resolution [Å]: 2.15 R-Factor: 0.190

CHAIN: A SWISS-PROT/TREMBL: P53634    KEYWORD: 3D-structure    Chloride    Disease mutation    Glycoprotein    Hydrolase    Lysosome    Polymorphism    Signal    Thiol protease    Zymogen    EC: 3.4.14.1 SCOP: b.61.5.1 All beta proteins    Streptavidin-like    Dipeptidyl peptidase I (cathepsin C), exclusion domain    Dipeptidyl peptidase I (cathepsin C), exclusion domain    Dipeptidyl peptidase I (cathepsin C), exclusion domain    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P53634    KEYWORD: 3D-structure    Chloride    Disease mutation    Glycoprotein    Hydrolase    Lysosome    Polymorphism    Signal    Thiol protease    Zymogen    EC: 3.4.14.1 SCOP: d.3.1.1 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Papain-like    Cathepsin C (dipeptidyl peptidase I), catalytic domain    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P53634    KEYWORD: 3D-structure    Chloride    Disease mutation    Glycoprotein    Hydrolase    Lysosome    Polymorphism    Signal    Thiol protease    Zymogen    EC: 3.4.14.1 SCOP: d.3.1.1 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Papain-like    Cathepsin C (dipeptidyl peptidase I), catalytic domain    Human (Homo sapiens) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1k3b_A_67 - HA => SUBCLASS : 2.1.1
1k3b_A_67 - HA => SUBCLASS : 2.4.2
1k3b_A_57 - HA => SUBCLASS : 3.4.1
1k3b_C_384 - HA => SUBCLASS : 4.1.1
1k3b_A_49 - HA => SUBCLASS : 4.2.1
1k3b_A_100 - HA => SUBCLASS : 4.9.3
1k3b_C_384 - HA => SUBCLASS : 6.1.1
1k3b_C_397 - HA => SUBCLASS : 10.1.1

Loops in ArchDB95 clusters

1k3b_A_67 - HA => SUBCLASS : 2.1.4
1k3b_A_67 - HA => SUBCLASS : 2.1.5
1k3b_A_67 - HA => SUBCLASS : 2.5.1
1k3b_A_38 - HA => SUBCLASS : 2.6.1
1k3b_A_49 - HA => SUBCLASS : 3.1.2
1k3b_A_57 - HA => SUBCLASS : 3.5.1
1k3b_C_384 - HA => SUBCLASS : 4.1.1
1k3b_C_397 - HA => SUBCLASS : 11.1.1

Loops in ArchDB-EC clusters

1k3b_C_397 - HA => SUBCLASS : 11.1.1

Loops not clustered in ArchDB

1k3b_A_90 - AR
1k3b_A_90 - AR
1k3b_C_397 - HA
1k3b_A_49 - HA
1k3b_A_57 - HA
1k3b_A_67 - HA
1k3b_A_75 - HA
1k3b_A_100 - HA
1k3b_C_384 - HA
1k3b_A_38 - HA
1k3b_A_13 - HA
1k3b_A_75 - HA
1k3b_A_13 - HA
1k3b_A_8 - HE
1k3b_B_333 - HH
1k3b_B_285 - HH
1k3b_B_279 - HH
1k3b_B_261 - HH
1k3b_B_234 - HH

1gec E - percentage of sequence identity: 72
1jqp A - percentage of sequence identity: 85
1khq A - percentage of sequence identity: 61