PDB: 1kap Compound: alkaline protease Classification: ZINC METALLOPROTEASE Entry date in PDB: 1995-10-15 Resolution [Å]: 1.64 R-Factor: 0.176

CHAIN: P SWISS-PROT/TREMBL: Q03023    KEYWORD: 3D-structure    Calcium-binding    Complete proteome    Hydrolase    Metal-binding    Metalloprotease    Repeat    Zinc    Zymogen    EC: 3.4.24.- SCOP: b.80.7.1 All beta proteins    Single-stranded right-handed beta-helix    beta-Roll    Serralysin-like metalloprotease, C-terminal domain    Metalloprotease    Pseudomonas aeruginosa SCOP: d.92.1.6 Alpha and beta proteins (a+b)    Zincin-like    Metalloproteases ("zincins"), catalytic domain    Serralysin-like metalloprotease, catalytic (N-terminal) domain    Metalloprotease    Pseudomonas aeruginosa GO:  extracellular matrix (sensu Metazoa)    calcium ion binding    metalloendopeptidase activity    metallopeptidase activity    zinc ion binding    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1kap_P_429 - HA => SUBCLASS : 4.1.1
1kap_P_27 - EH => SUBCLASS : 2.2.2

Loops in ArchDB95 clusters

1kap_P_27 - EH => SUBCLASS : 2.2.3
1kap_P_330 - AR => SUBCLASS : 5.24.1
1kap_P_339 - AR => SUBCLASS : 5.24.1
1kap_P_348 - AR => SUBCLASS : 5.31.1
1kap_P_366 - AR => SUBCLASS : 5.31.1
1kap_P_320 - AR => SUBCLASS : 7.24.1
1kap_P_390 - AR => SUBCLASS : 8.35.1
1kap_P_429 - HA => SUBCLASS : 4.1.1
1kap_P_440 - HA => SUBCLASS : 8.29.1

Loops in ArchDB-EC clusters

1kap_P_408 - HE => SUBCLASS : 4.26.2

Loops not clustered in ArchDB

1kap_P_455 - AR
1kap_P_375 - AR
1kap_P_455 - AR
1kap_P_109 - AR
1kap_P_122 - AR
1kap_P_258 - AR
1kap_P_281 - AR
1kap_P_291 - AR
1kap_P_302 - AR
1kap_P_320 - AR
1kap_P_330 - AR
1kap_P_339 - AR
1kap_P_348 - AR
1kap_P_357 - AR
1kap_P_366 - AR
1kap_P_390 - AR
1kap_P_357 - AR
1kap_P_109 - AR
1kap_P_122 - AR
1kap_P_258 - AR
1kap_P_281 - AR
1kap_P_291 - AR
1kap_P_302 - AR
1kap_P_375 - AR
1kap_P_149 - EH
1kap_P_55 - EH
1kap_P_401 - EH
1kap_P_440 - HA
1kap_P_429 - HA
1kap_P_418 - HA
1kap_P_310 - HA
1kap_P_310 - HA
1kap_P_418 - HA
1kap_P_23 - HA
1kap_P_135 - HA
1kap_P_135 - HA
1kap_P_23 - HA
1kap_P_90 - HE
1kap_P_4 - HE
1kap_P_32 - HE
1kap_P_236 - HE
1kap_P_169 - HH
1kap_P_67 - HH

1akl - - percentage of sequence identity: 100
1h71 P - percentage of sequence identity: 64
1jiw P - percentage of sequence identity: 100
1o0q A - percentage of sequence identity: 64
1o0t A - percentage of sequence identity: 64
1om6 A - percentage of sequence identity: 64
1om7 A - percentage of sequence identity: 64
1om8 A - percentage of sequence identity: 64
1omj A - percentage of sequence identity: 64