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Information on 1l6m
PDB: 1l6m
Compound: neutrophil gelatinase-associated lipocalin
Classification: TRANSPORT PROTEIN
Entry date in PDB: 2003-03-11
Resolution [Å]: 2.40
R-Factor: 0.234


CHAIN: A
SWISS-PROT/TREMBL: P80188
   KEYWORD: 3D-structure    Glycoprotein    Lipocalin    Pyrrolidone carboxylic acid    Signal   
SCOP: b.60.1.1 All beta proteins    Lipocalins    Lipocalins    Retinol binding protein-like    Neutrophil gelatinase-associated lipocalin (NGAL)    Human (Homo sapiens)
GO:  binding    transporter activity    transport   


CHAIN: B
SWISS-PROT/TREMBL: P80188
   KEYWORD: 3D-structure    Glycoprotein    Lipocalin    Pyrrolidone carboxylic acid    Signal   
SCOP: b.60.1.1 All beta proteins    Lipocalins    Lipocalins    Retinol binding protein-like    Neutrophil gelatinase-associated lipocalin (NGAL)    Human (Homo sapiens)
GO:  binding    transporter activity    transport   


CHAIN: C
SWISS-PROT/TREMBL: P80188
   KEYWORD: 3D-structure    Glycoprotein    Lipocalin    Pyrrolidone carboxylic acid    Signal   
SCOP: b.60.1.1 All beta proteins    Lipocalins    Lipocalins    Retinol binding protein-like    Neutrophil gelatinase-associated lipocalin (NGAL)    Human (Homo sapiens)
GO:  binding    transporter activity    transport   
1l6m Image
Image Source: PDB

Stored Loops of 1l6m

Loops in ArchDB40 clusters

1l6m_A_118 - HA => SUBCLASS : 2.1.1
1l6m_A_118 - HA => SUBCLASS : 2.1.2
1l6m_A_64 - HA => SUBCLASS : 2.1.2
1l6m_A_64 - HA => SUBCLASS : 2.1.5
1l6m_A_103 - HA => SUBCLASS : 4.20.1
1l6m_A_53 - HA => SUBCLASS : 5.1.2
1l6m_A_130 - EH => SUBCLASS : 6.13.1

Loops in ArchDB95 clusters

1l6m_A_130 - EH => SUBCLASS : 6.12.1
1l6m_A_118 - HA => SUBCLASS : 2.1.1
1l6m_A_118 - HA => SUBCLASS : 2.1.3
1l6m_A_64 - HA => SUBCLASS : 2.1.3
1l6m_A_103 - HA => SUBCLASS : 4.21.1
1l6m_A_53 - HA => SUBCLASS : 5.1.1
1l6m_A_75 - HA => SUBCLASS : 5.11.1

Loops not clustered in ArchDB

1l6m_A_29 - HA
1l6m_A_91 - HA
1l6m_A_146 - HE

Homologous structures to 1l6m classified in ArchDB

1dfv A - percentage of sequence identity: 99
1dfv B - percentage of sequence identity: 99
1l6m A - percentage of sequence identity: 100
1l6m B - percentage of sequence identity: 100
1l6m C - percentage of sequence identity: 100
1ngl A - percentage of sequence identity: 99
1qqs A - percentage of sequence identity: 97
1x71 A - percentage of sequence identity: 100
1x71 B - percentage of sequence identity: 100
1x71 C - percentage of sequence identity: 100
1x89 A - percentage of sequence identity: 100
1x89 B - percentage of sequence identity: 100
1x89 C - percentage of sequence identity: 100
1x8u A - percentage of sequence identity: 100
1x8u B - percentage of sequence identity: 100
1x8u C - percentage of sequence identity: 100