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Information on 1m2t
PDB: 1m2t
Compound: mistletoe lectin i a chain
Classification: RIBOSOME INHIBITOR, HYDROLASE
Entry date in PDB: 2003-06-24
Resolution [Å]: 1.89
R-Factor: 0.210


CHAIN: A
SWISS-PROT/TREMBL: P81446
   KEYWORD: 3D-structure    Glycoprotein    Hydrolase    Lectin    Plant defense    Polymorphism    Protein synthesis inhibitor    Repeat    Toxin   
EC: 3.2.2.22
SCOP: d.165.1.1 Alpha and beta proteins (a+b)    Ribosome inactivating proteins (RIP)    Ribosome inactivating proteins (RIP)    Plant cytotoxins    Mistletoe lectin I A-chain    European mistletoe (Viscum album)
GO:  rRNA N-glycosylase activity    negative regulation of protein biosynthesis   


CHAIN: B
SWISS-PROT/TREMBL: P81830
   KEYWORD: 3D-structure    Glycoprotein    Lectin    Plant defense    Repeat   
SCOP: b.42.2.1 All beta proteins    beta-Trefoil    Ricin B-like lectins    Ricin B-like    Plant cytotoxin B-chain (lectin)    European mistletoe (Viscum album)
SCOP: b.42.2.1 All beta proteins    beta-Trefoil    Ricin B-like lectins    Ricin B-like    Plant cytotoxin B-chain (lectin)    European mistletoe (Viscum album)
GO:  
1m2t Image
Image Source: PDB

Stored Loops of 1m2t

Loops in ArchDB40 clusters

1m2t_A_28 - HA => SUBCLASS : 2.1.1
1m2t_A_76 - HA => SUBCLASS : 2.3.1
1m2t_B_399 - HA => SUBCLASS : 2.3.1
1m2t_B_464 - HA => SUBCLASS : 3.1.1
1m2t_B_297 - HA => SUBCLASS : 3.1.1
1m2t_B_421 - HA => SUBCLASS : 3.1.1
1m2t_B_339 - HA => SUBCLASS : 3.1.1
1m2t_B_346 - HA => SUBCLASS : 4.1.1
1m2t_A_65 - HA => SUBCLASS : 4.1.2
1m2t_A_53 - HA => SUBCLASS : 4.2.1
1m2t_B_472 - HA => SUBCLASS : 5.8.1
1m2t_B_429 - HA => SUBCLASS : 5.9.1
1m2t_B_429 - HA => SUBCLASS : 5.9.3
1m2t_B_353 - HA => SUBCLASS : 8.1.1
1m2t_B_310 - HA => SUBCLASS : 8.1.1
1m2t_B_437 - HA => SUBCLASS : 8.1.1
1m2t_B_268 - HA => SUBCLASS : 10.8.1
1m2t_A_2 - EH => SUBCLASS : 4.2.2
1m2t_A_105 - EH => SUBCLASS : 6.17.1
1m2t_A_164 - HH => SUBCLASS : 1.2.1
1m2t_A_164 - HH => SUBCLASS : 1.2.2
1m2t_A_132 - HH => SUBCLASS : 5.32.1

Loops in ArchDB95 clusters

1m2t_B_380 - AR => SUBCLASS : 6.43.1
1m2t_B_367 - AR => SUBCLASS : 8.8.2
1m2t_B_493 - AR => SUBCLASS : 8.8.2
1m2t_B_399 - HA => SUBCLASS : 2.3.1
1m2t_B_421 - HA => SUBCLASS : 3.1.1
1m2t_B_297 - HA => SUBCLASS : 3.1.1
1m2t_B_464 - HA => SUBCLASS : 3.1.1
1m2t_B_339 - HA => SUBCLASS : 3.1.1
1m2t_B_346 - HA => SUBCLASS : 4.1.1
1m2t_B_472 - HA => SUBCLASS : 5.5.2
1m2t_B_429 - HA => SUBCLASS : 5.6.1
1m2t_B_388 - HA => SUBCLASS : 5.28.2
1m2t_B_310 - HA => SUBCLASS : 8.3.1
1m2t_B_353 - HA => SUBCLASS : 9.4.1
1m2t_B_437 - HA => SUBCLASS : 9.4.1
1m2t_B_268 - HA => SUBCLASS : 10.5.1

Loops in ArchDB-EC clusters

1m2t_A_164 - HH => SUBCLASS : 1.2.2

Loops not clustered in ArchDB

1m2t_B_451 - AR
1m2t_B_406 - AR
1m2t_B_323 - AR
1m2t_B_282 - AR
1m2t_A_37 - AR
1m2t_B_258 - AR
1m2t_A_37 - AR
1m2t_A_53 - HA
1m2t_A_65 - HA
1m2t_A_28 - HA
1m2t_A_76 - HA
1m2t_A_85 - HA
1m2t_A_213 - HA
1m2t_A_85 - HA
1m2t_B_480 - HA
1m2t_A_213 - HA
1m2t_B_305 - HA
1m2t_B_261 - HA
1m2t_A_190 - HE
1m2t_A_14 - HE
1m2t_A_170 - HH
1m2t_A_149 - HH
1m2t_A_115 - HH

Homologous structures to 1m2t classified in ArchDB

1ce7 A - percentage of sequence identity: 80
1onk A - percentage of sequence identity: 87
1onk B - percentage of sequence identity: 90
1pc8 A - percentage of sequence identity: 82
1pum A - percentage of sequence identity: 91
1puu A - percentage of sequence identity: 91
1sz6 A - percentage of sequence identity: 91
1tfm A - percentage of sequence identity: 82
1yf8 A - percentage of sequence identity: 82
2mll A - percentage of sequence identity: 80