PDB: 1msw Compound: DNA-directed RNA polymerase Classification: TRANSCRIPTION/DNA/RNA Entry date in PDB: 2002-11-15 Resolution [Å]: 2.10 R-Factor: 0.241

CHAIN: D SWISS-PROT/TREMBL: P00573    KEYWORD: 3D-structure    DNA-directed RNA polymerase    Transcription    Transferase    EC: 2.7.7.6 SCOP: e.8.1.3 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    T7 RNA polymerase    T7 RNA polymerase    Bacteriophage T7 GO:  DNA binding    DNA-directed RNA polymerase activity    transcription

Image Source: PDB

Loops in ArchDB40 clusters

1msw_D_725 - HA => SUBCLASS : 3.1.1
1msw_D_808 - HA => SUBCLASS : 3.17.1
1msw_D_418 - HA => SUBCLASS : 4.2.1
1msw_D_710 - HA => SUBCLASS : 6.1.1
1msw_D_813 - EH => SUBCLASS : 1.1.7
1msw_D_243 - EH => SUBCLASS : 1.1.9
1msw_D_328 - EH => SUBCLASS : 1.1.15
1msw_D_529 - AR => SUBCLASS : 1.1.16
1msw_D_529 - AR => SUBCLASS : 3.2.2
1msw_D_670 - HH => SUBCLASS : 1.2.6
1msw_D_541 - HH => SUBCLASS : 2.2.5
1msw_D_541 - HH => SUBCLASS : 2.2.10
1msw_D_821 - HH => SUBCLASS : 2.3.7
1msw_D_613 - HH => SUBCLASS : 3.2.24

Loops in ArchDB95 clusters

1msw_D_328 - EH => SUBCLASS : 1.1.7
1msw_D_243 - EH => SUBCLASS : 1.1.13
1msw_D_328 - EH => SUBCLASS : 1.1.21
1msw_D_328 - EH => SUBCLASS : 1.1.24
1msw_D_813 - EH => SUBCLASS : 1.2.2
1msw_D_529 - AR => SUBCLASS : 3.1.4
1msw_D_529 - AR => SUBCLASS : 3.1.7
1msw_D_443 - AR => SUBCLASS : 3.7.3
1msw_D_670 - HH => SUBCLASS : 1.2.1
1msw_D_670 - HH => SUBCLASS : 1.2.3
1msw_D_541 - HH => SUBCLASS : 2.2.9
1msw_D_541 - HH => SUBCLASS : 2.2.12
1msw_D_541 - HH => SUBCLASS : 2.2.14
1msw_D_821 - HH => SUBCLASS : 2.3.6
1msw_D_613 - HH => SUBCLASS : 3.1.22
1msw_D_725 - HA => SUBCLASS : 3.1.1
1msw_D_418 - HA => SUBCLASS : 3.1.2
1msw_D_808 - HA => SUBCLASS : 3.19.1
1msw_D_710 - HA => SUBCLASS : 4.1.1
1msw_D_710 - HA => SUBCLASS : 5.12.1

Loops in ArchDB-EC clusters

1msw_D_821 - HH => SUBCLASS : 2.7.1

Loops not clustered in ArchDB

1msw_D_718 - AR
1msw_D_718 - AR
1msw_D_734 - AR
1msw_D_443 - AR
1msw_D_529 - AR
1msw_D_734 - AR
1msw_D_297 - EH
1msw_D_426 - EH
1msw_D_450 - EH
1msw_D_754 - EH
1msw_D_534 - EH
1msw_D_747 - HA
1msw_D_227 - HA
1msw_D_747 - HA
1msw_D_227 - HA
1msw_D_418 - HA
1msw_D_710 - HA
1msw_D_725 - HA
1msw_D_808 - HA
1msw_D_208 - HE
1msw_D_248 - HE
1msw_D_771 - HE
1msw_D_690 - HE
1msw_D_508 - HE
1msw_D_438 - HE
1msw_D_379 - HE
1msw_D_314 - HE
1msw_D_453 - HH
1msw_D_18 - HH
1msw_D_30 - HH
1msw_D_71 - HH
1msw_D_111 - HH
1msw_D_134 - HH
1msw_D_162 - HH
1msw_D_304 - HH
1msw_D_332 - HH
1msw_D_168 - HH
1msw_D_475 - HH
1msw_D_486 - HH
1msw_D_496 - HH
1msw_D_555 - HH
1msw_D_570 - HH
1msw_D_627 - HH
1msw_D_643 - HH
1msw_D_655 - HH
1msw_D_176 - HH

1cez A - percentage of sequence identity: 100
1h38 A - percentage of sequence identity: 100
1h38 B - percentage of sequence identity: 100
1h38 C - percentage of sequence identity: 100
1h38 D - percentage of sequence identity: 100
1qln A - percentage of sequence identity: 100
1s0v A - percentage of sequence identity: 100
1s0v B - percentage of sequence identity: 100
1s0v C - percentage of sequence identity: 100
1s0v D - percentage of sequence identity: 100
1s76 D - percentage of sequence identity: 100
1s77 D - percentage of sequence identity: 100
4rnp A - percentage of sequence identity: 100
4rnp B - percentage of sequence identity: 100
4rnp C - percentage of sequence identity: 100