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Information on 1noy
PDB: 1noy
Compound: DNA polymerase
Classification: COMPLEX (NUCLEOTIDYLTRANSFERASE/DNA)
Entry date in PDB: 1996-10-14
Resolution [Å]: 2.20
R-Factor: 0.222


CHAIN: A
SWISS-PROT/TREMBL: P04415
   KEYWORD: 3D-structure    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Transferase   
EC: 2.7.7.7
SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of family B DNA polymerases    Bacteriophage T4
GO:  3'-5' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nucleotide binding    DNA replication   


CHAIN: B
SWISS-PROT/TREMBL: P04415
   KEYWORD: 3D-structure    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Transferase   
EC: 2.7.7.7
SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of family B DNA polymerases    Bacteriophage T4
GO:  3'-5' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nucleotide binding    DNA replication   
1noy Image
Image Source: PDB

Stored Loops of 1noy

Loops in ArchDB95 clusters

1noy_A_266 - EH => SUBCLASS : 1.1.9
1noy_A_183 - EH => SUBCLASS : 2.1.1
1noy_A_58 - EH => SUBCLASS : 3.3.1
1noy_A_58 - EH => SUBCLASS : 3.3.3
1noy_A_258 - AR => SUBCLASS : 1.1.2
1noy_A_26 - AR => SUBCLASS : 3.8.4
1noy_A_177 - HE => SUBCLASS : 0.1.47
1noy_A_191 - HE => SUBCLASS : 4.8.4
1noy_A_4 - HA => SUBCLASS : 2.3.1
1noy_A_14 - HA => SUBCLASS : 3.1.1
1noy_A_130 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

1noy_A_270 - HH => SUBCLASS : 8.7.1

Loops not clustered in ArchDB

1noy_A_258 - AR
1noy_B_259 - AR
1noy_A_26 - AR
1noy_B_25 - AR
1noy_B_209 - EH
1noy_B_266 - EH
1noy_B_183 - EH
1noy_B_142 - EH
1noy_B_58 - EH
1noy_A_142 - EH
1noy_A_209 - EH
1noy_A_245 - HA
1noy_A_14 - HA
1noy_A_37 - HA
1noy_A_108 - HA
1noy_A_245 - HA
1noy_B_4 - HA
1noy_B_14 - HA
1noy_B_37 - HA
1noy_B_108 - HA
1noy_B_132 - HA
1noy_B_245 - HA
1noy_A_108 - HA
1noy_A_37 - HA
1noy_A_130 - HA
1noy_A_4 - HA
1noy_A_82 - HE
1noy_A_219 - HE
1noy_B_84 - HE
1noy_B_177 - HE
1noy_B_191 - HE
1noy_B_219 - HE
1noy_B_316 - HH
1noy_A_63 - HH
1noy_A_161 - HH
1noy_A_287 - HH
1noy_A_337 - HH
1noy_B_63 - HH
1noy_B_270 - HH
1noy_A_309 - HH
1noy_B_287 - HH
1noy_B_337 - HH

Homologous structures to 1noy classified in ArchDB

1clq A - percentage of sequence identity: 62
1ig9 A - percentage of sequence identity: 62
1ih7 A - percentage of sequence identity: 62
1noy A - percentage of sequence identity: 100
1noy B - percentage of sequence identity: 100
1noz A - percentage of sequence identity: 100
1noz B - percentage of sequence identity: 100
1q9x A - percentage of sequence identity: 62
1q9x B - percentage of sequence identity: 62
1q9x C - percentage of sequence identity: 62
1q9x D - percentage of sequence identity: 62
1q9y A - percentage of sequence identity: 62
1rv2 A - percentage of sequence identity: 62
1rv2 B - percentage of sequence identity: 62
1rv2 C - percentage of sequence identity: 62
1rv2 D - percentage of sequence identity: 62
1waf A - percentage of sequence identity: 62
1waf B - percentage of sequence identity: 62
1waj - - percentage of sequence identity: 62