PDB: 1nrl Compound: orphan nuclear receptor pxr Classification: TRANSCRIPTION Entry date in PDB: 2003-08-19 Resolution [Å]: 2.00 R-Factor: 0.216

CHAIN: A SWISS-PROT/TREMBL: O75469    KEYWORD: 3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Polymorphism    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Pregnane x receptor, PXR    Human (Homo sapiens) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent    CHAIN: B SWISS-PROT/TREMBL: O75469    KEYWORD: 3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Polymorphism    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Pregnane x receptor, PXR    Human (Homo sapiens) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1nrl_A_269 - HE => SUBCLASS : 0.1.16
1nrl_A_269 - HE => SUBCLASS : 0.1.41
1nrl_A_193 - HE => SUBCLASS : 1.2.8
1nrl_A_298 - HA => SUBCLASS : 2.3.1
1nrl_A_211 - HA => SUBCLASS : 3.1.1
1nrl_A_292 - HA => SUBCLASS : 4.1.1
1nrl_A_292 - HA => SUBCLASS : 4.1.2
1nrl_A_240 - HH => SUBCLASS : 1.1.3
1nrl_A_315 - HH => SUBCLASS : 1.1.6
1nrl_A_315 - HH => SUBCLASS : 1.1.10
1nrl_A_240 - HH => SUBCLASS : 1.1.21
1nrl_A_322 - HH => SUBCLASS : 3.2.5
1nrl_A_322 - HH => SUBCLASS : 3.2.7
1nrl_A_322 - HH => SUBCLASS : 3.2.26

Loops in ArchDB95 clusters

1nrl_A_240 - HH => SUBCLASS : 1.1.4
1nrl_A_240 - HH => SUBCLASS : 1.1.8
1nrl_A_315 - HH => SUBCLASS : 1.1.12
1nrl_A_315 - HH => SUBCLASS : 1.1.40
1nrl_A_315 - HH => SUBCLASS : 1.2.14
1nrl_A_322 - HH => SUBCLASS : 3.1.6
1nrl_A_269 - HE => SUBCLASS : 0.1.1
1nrl_A_269 - HE => SUBCLASS : 0.1.16
1nrl_A_298 - HA => SUBCLASS : 2.3.1
1nrl_A_211 - HA => SUBCLASS : 3.1.1
1nrl_A_292 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1nrl_A_222 - EH
1nrl_A_304 - EH
1nrl_A_145 - HH
1nrl_A_262 - HH
1nrl_A_337 - HH
1nrl_A_359 - HH
1nrl_A_389 - HH

1ilg A - percentage of sequence identity: 100
1ilh A - percentage of sequence identity: 100
1m13 A - percentage of sequence identity: 100
1nrl A - percentage of sequence identity: 100
1nrl B - percentage of sequence identity: 100
1skx A - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0