PDB: 1nzo Compound: penicillin-binding protein 5 Classification: HYDROLASE Entry date in PDB: 2004-01-13 Resolution [Å]: 1.85 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P04287    KEYWORD: 3D-structure    Carboxypeptidase    Cell wall    Complete proteome    Hydrolase    Inner membrane    Peptidoglycan synthesis    Signal    EC: 3.4.16.4 SCOP: b.105.1.1 All beta proteins    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Escherichia coli SCOP: e.3.1.1 Multi-domain proteins (alpha and beta)    beta-lactamase/transpeptidase-like    beta-lactamase/transpeptidase-like    beta-Lactamase/D-ala carboxypeptidase    Penicillin-binding protein 5, N-terminal domain    Escherichia coli GO:  serine carboxypeptidase activity    serine carboxypeptidase activity    serine carboxypeptidase activity    proteolysis and peptidolysis    proteolysis and peptidolysis    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1nzo_A_250 - HE => SUBCLASS : 0.1.12
1nzo_A_187 - HA => SUBCLASS : 2.1.1
1nzo_A_209 - HA => SUBCLASS : 3.2.1
1nzo_A_17 - HA => SUBCLASS : 4.1.2
1nzo_A_221 - HA => SUBCLASS : 4.22.1
1nzo_A_162 - HH => SUBCLASS : 1.2.3
1nzo_A_99 - HH => SUBCLASS : 2.2.11

Loops in ArchDB95 clusters

1nzo_A_309 - AR => SUBCLASS : 1.2.16
1nzo_A_162 - HH => SUBCLASS : 1.2.2
1nzo_A_99 - HH => SUBCLASS : 2.2.3
1nzo_A_99 - HH => SUBCLASS : 2.2.11
1nzo_A_187 - HA => SUBCLASS : 2.1.1
1nzo_A_209 - HA => SUBCLASS : 3.3.1
1nzo_A_17 - HA => SUBCLASS : 4.1.2

Loops not clustered in ArchDB

1nzo_A_193 - AR
1nzo_A_262 - AR
1nzo_A_287 - AR
1nzo_A_296 - AR
1nzo_A_319 - AR
1nzo_A_234 - EH
1nzo_A_96 - EH
1nzo_A_30 - EH
1nzo_A_68 - HA
1nzo_A_328 - HA
1nzo_A_276 - HA
1nzo_A_46 - HE
1nzo_A_177 - HE
1nzo_A_112 - HH
1nzo_A_126 - HH

1hd8 A - percentage of sequence identity: 99
1nzu A - percentage of sequence identity: 100
1sdn A - percentage of sequence identity: 99
1z6f A - percentage of sequence identity: 100