PDB: 1o60 Compound: 2-dehydro-3-deoxyphosphooctonate aldolase Classification: TRANSFERASE Entry date in PDB: 2003-11-11 Resolution [Å]: 1.80 R-Factor: 0.207

CHAIN: A SWISS-PROT/TREMBL: P45251    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Haemophilus influenzae GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism    CHAIN: B SWISS-PROT/TREMBL: P45251    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Haemophilus influenzae GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism    CHAIN: C SWISS-PROT/TREMBL: P45251    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Haemophilus influenzae GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism    CHAIN: D SWISS-PROT/TREMBL: P45251    KEYWORD: Complete proteome    Lipopolysaccharide biosynthesis    Transferase    EC: 2.5.1.55 SCOP: c.1.10.4 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I DAHP synthetase    3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)    Haemophilus influenzae GO:  cytoplasm    3-deoxy-8-phosphooctulonate synthase activity    biosynthesis    metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1o60_A_255 - EH => SUBCLASS : 0.1.9
1o60_A_255 - EH => SUBCLASS : 1.2.1
1o60_A_91 - EH => SUBCLASS : 2.1.21
1o60_A_111 - EH => SUBCLASS : 6.3.1
1o60_A_163 - AR => SUBCLASS : 2.10.1
1o60_A_6 - HA => SUBCLASS : 2.3.1
1o60_A_170 - HA => SUBCLASS : 3.14.1

Loops in ArchDB-EC clusters

1o60_A_150 - HE => SUBCLASS : 3.1.2

Loops not clustered in ArchDB

1o60_A_11 - AR
1o60_A_235 - AR
1o60_A_177 - AR
1o60_A_163 - AR
1o60_A_11 - AR
1o60_A_235 - AR
1o60_A_177 - AR
1o60_A_20 - EH
1o60_A_52 - EH
1o60_A_134 - EH
1o60_A_196 - EH
1o60_A_240 - HA
1o60_A_170 - HA
1o60_A_6 - HA
1o60_A_240 - HA
1o60_A_76 - HE
1o60_A_37 - HE
1o60_A_102 - HE
1o60_A_122 - HE
1o60_A_221 - HE
1o60_A_260 - HH
1o60_A_200 - HH

1d9e A - percentage of sequence identity: 81
1d9e B - percentage of sequence identity: 81
1d9e C - percentage of sequence identity: 81
1d9e D - percentage of sequence identity: 81
1g7u A - percentage of sequence identity: 81
1g7v A - percentage of sequence identity: 81
1gg0 A - percentage of sequence identity: 81
1o60 A - percentage of sequence identity: 100
1o60 B - percentage of sequence identity: 100
1o60 C - percentage of sequence identity: 100
1o60 D - percentage of sequence identity: 100
1phq A - percentage of sequence identity: 81
1phw A - percentage of sequence identity: 81
1pl9 A - percentage of sequence identity: 81
1q3n A - percentage of sequence identity: 81
1x6u A - percentage of sequence identity: 81
1x8f A - percentage of sequence identity: 81