PDB: 1p42 Compound: udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine d Classification: HYDROLASE Entry date in PDB: 2003-06-10 Resolution [Å]: 2.00 R-Factor: 0.199

CHAIN: A SWISS-PROT/TREMBL: O67648    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Lipid A biosynthesis    Lipid synthesis    EC: 3.5.1.- SCOP: d.14.1.7 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    Aquifex aeolicus SCOP: d.14.1.7 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    Aquifex aeolicus GO:  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity    lipid A biosynthesis    CHAIN: B SWISS-PROT/TREMBL: O67648    KEYWORD: 3D-structure    Complete proteome    Hydrolase    Lipid A biosynthesis    Lipid synthesis    EC: 3.5.1.- SCOP: d.14.1.7 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    Aquifex aeolicus SCOP: d.14.1.7 Alpha and beta proteins (a+b)    Ribosomal protein S5 domain 2-like    Ribosomal protein S5 domain 2-like    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC    Aquifex aeolicus GO:  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity    lipid A biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1p42_A_109 - HE => SUBCLASS : 0.1.58
1p42_A_78 - HE => SUBCLASS : 3.1.4
1p42_A_136 - HA => SUBCLASS : 2.1.3
1p42_A_11 - HA => SUBCLASS : 4.1.1
1p42_A_11 - HA => SUBCLASS : 6.1.1
1p42_A_257 - EH => SUBCLASS : 3.4.1
1p42_A_254 - AR => SUBCLASS : 1.3.2
1p42_A_3 - AR => SUBCLASS : 3.2.1
1p42_A_44 - AR => SUBCLASS : 3.4.4
1p42_A_130 - AR => SUBCLASS : 4.5.1
1p42_A_44 - AR => SUBCLASS : 5.3.1
1p42_A_143 - AR => SUBCLASS : 5.11.2

Loops in ArchDB95 clusters

1p42_A_257 - EH => SUBCLASS : 3.6.1
1p42_A_254 - AR => SUBCLASS : 1.3.2
1p42_A_254 - AR => SUBCLASS : 1.3.3
1p42_A_3 - AR => SUBCLASS : 3.1.6
1p42_A_3 - AR => SUBCLASS : 3.1.7
1p42_A_44 - AR => SUBCLASS : 3.2.5
1p42_A_130 - AR => SUBCLASS : 3.7.1
1p42_A_130 - AR => SUBCLASS : 4.3.2
1p42_A_143 - AR => SUBCLASS : 5.12.2
1p42_A_109 - HE => SUBCLASS : 0.1.3
1p42_A_78 - HE => SUBCLASS : 3.3.9
1p42_A_136 - HA => SUBCLASS : 2.1.4
1p42_A_136 - HA => SUBCLASS : 2.1.5
1p42_A_11 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

1p42_A_78 - HE => SUBCLASS : 4.3.1

Loops not clustered in ArchDB

1p42_A_254 - AR
1p42_A_170 - AR
1p42_A_3 - AR
1p42_A_23 - AR
1p42_A_44 - AR
1p42_A_120 - AR
1p42_A_130 - AR
1p42_A_143 - AR
1p42_A_170 - AR
1p42_A_120 - AR
1p42_A_23 - AR
1p42_A_72 - EH
1p42_A_92 - EH
1p42_A_192 - EH
1p42_A_216 - EH
1p42_A_154 - HA
1p42_A_136 - HA
1p42_A_61 - HA
1p42_A_53 - HA
1p42_A_37 - HA
1p42_A_11 - HA
1p42_A_37 - HA
1p42_A_53 - HA
1p42_A_154 - HA
1p42_A_61 - HA
1p42_A_234 - HE
1p42_A_195 - HE

1p42 A - percentage of sequence identity: 100
1p42 B - percentage of sequence identity: 100
1xxe A - percentage of sequence identity: 99
1yh8 A - percentage of sequence identity: 100
1yh8 B - percentage of sequence identity: 100
1yhc A - percentage of sequence identity: 100
1yhc B - percentage of sequence identity: 100