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Information on 1pk6
PDB: 1pk6
Compound: complement c1q subcomponent, a chain precursor
Classification: IMMUNE SYSTEM
Entry date in PDB: 2003-10-21
Resolution [Å]: 1.85
R-Factor: 0.201


CHAIN: A
SWISS-PROT/TREMBL: P02745
   KEYWORD: Collagen    Complement pathway    Glycoprotein    Hydroxylation    Plasma    Repeat    Signal   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Complement c1q globular head, A chain    Human (Homo sapiens)
GO:  cytoplasm    phosphate transport   


CHAIN: B
SWISS-PROT/TREMBL: P02746
   KEYWORD: Collagen    Complement pathway    Disease mutation    Glycoprotein    Hydroxylation    Plasma    Pyrrolidone carboxylic acid    Repeat    Signal   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Complement c1q globular head, B chain    Human (Homo sapiens)
GO:  cytoplasm    phosphate transport   


CHAIN: C
SWISS-PROT/TREMBL: P02747
   KEYWORD: Collagen    Complement pathway    Disease mutation    Glycoprotein    Hydroxylation    Plasma    Repeat    Signal   
SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Complement c1q globular head, C chain    Human (Homo sapiens)
GO:  cytoplasm    phosphate transport   
1pk6 Image
Image Source: PDB

Stored Loops of 1pk6

Loops in ArchDB40 clusters

1pk6_A_149 - HA => SUBCLASS : 2.1.1
1pk6_C_150 - HA => SUBCLASS : 2.4.1
1pk6_C_123 - HA => SUBCLASS : 4.1.1
1pk6_A_122 - HA => SUBCLASS : 4.1.1
1pk6_A_122 - HA => SUBCLASS : 4.1.2
1pk6_A_108 - AR => SUBCLASS : 2.1.4
1pk6_C_136 - AR => SUBCLASS : 3.2.5
1pk6_A_177 - AR => SUBCLASS : 4.4.1
1pk6_C_173 - AR => SUBCLASS : 4.4.1
1pk6_A_128 - AR => SUBCLASS : 4.40.1

Loops in ArchDB95 clusters

1pk6_A_108 - AR => SUBCLASS : 2.1.2
1pk6_A_108 - AR => SUBCLASS : 2.1.9
1pk6_A_177 - AR => SUBCLASS : 2.3.1
1pk6_C_173 - AR => SUBCLASS : 2.3.1
1pk6_A_177 - AR => SUBCLASS : 2.3.2
1pk6_C_173 - AR => SUBCLASS : 2.3.2
1pk6_B_179 - AR => SUBCLASS : 2.3.2
1pk6_C_136 - AR => SUBCLASS : 3.1.10
1pk6_A_177 - AR => SUBCLASS : 3.3.2
1pk6_C_173 - AR => SUBCLASS : 3.3.2
1pk6_B_117 - AR => SUBCLASS : 3.33.1
1pk6_A_113 - AR => SUBCLASS : 3.33.1
1pk6_B_164 - AR => SUBCLASS : 4.53.1
1pk6_A_149 - HA => SUBCLASS : 2.1.1
1pk6_C_150 - HA => SUBCLASS : 2.1.2
1pk6_A_149 - HA => SUBCLASS : 2.1.4
1pk6_B_153 - HA => SUBCLASS : 2.2.50
1pk6_B_126 - HA => SUBCLASS : 4.1.1
1pk6_A_122 - HA => SUBCLASS : 4.1.1
1pk6_C_123 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1pk6_A_94 - AR
1pk6_B_139 - AR
1pk6_B_132 - AR
1pk6_C_188 - AR
1pk6_C_159 - AR
1pk6_C_129 - AR
1pk6_C_114 - AR
1pk6_A_192 - AR
1pk6_A_166 - AR
1pk6_A_160 - AR
1pk6_A_135 - AR
1pk6_B_194 - AR
1pk6_C_93 - HA
1pk6_B_96 - HA

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