PDB: 1qb2 Compound: human signal recognition particle 54 kd protein Classification: SIGNALING PROTEIN Entry date in PDB: 1999-10-12 Resolution [Å]: 2.10 R-Factor: 0.245

CHAIN: A SWISS-PROT/TREMBL: P61011    KEYWORD: 3D-structure    GTP-binding    RNA-binding    Signal recognition particle    SCOP: a.36.1.1 All alpha proteins    Signal peptide-binding domain    Signal peptide-binding domain    Signal peptide-binding domain    SRP54M    Human (Homo sapiens) GO:  signal recognition particle (sensu Eukaryota)    GTP binding    nucleoside-triphosphatase activity    nucleotide binding    RNA binding    protein targeting    SRP-dependent cotranslational protein-membrane targeting    CHAIN: B SWISS-PROT/TREMBL: P61011    KEYWORD: 3D-structure    GTP-binding    RNA-binding    Signal recognition particle    SCOP: a.36.1.1 All alpha proteins    Signal peptide-binding domain    Signal peptide-binding domain    Signal peptide-binding domain    SRP54M    Human (Homo sapiens) GO:  signal recognition particle (sensu Eukaryota)    GTP binding    nucleoside-triphosphatase activity    nucleotide binding    RNA binding    protein targeting    SRP-dependent cotranslational protein-membrane targeting

Image Source: PDB

Loops in ArchDB40 clusters

1qb2_A_393 - HH => SUBCLASS : 1.2.3
1qb2_A_393 - HH => SUBCLASS : 1.2.11
1qb2_A_365 - HH => SUBCLASS : 2.1.1
1qb2_A_365 - HH => SUBCLASS : 2.1.2
1qb2_A_401 - HH => SUBCLASS : 3.1.1
1qb2_A_384 - HH => SUBCLASS : 3.6.4

Loops in ArchDB95 clusters

1qb2_A_393 - HH => SUBCLASS : 1.2.2
1qb2_A_393 - HH => SUBCLASS : 1.2.6
1qb2_A_365 - HH => SUBCLASS : 2.1.1
1qb2_A_365 - HH => SUBCLASS : 2.1.3
1qb2_A_365 - HH => SUBCLASS : 2.1.6
1qb2_A_401 - HH => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1qb2_A_329 - HH
1qb2_A_343 - HH

1mfq C - percentage of sequence identity: 100
1qb2 A - percentage of sequence identity: 100
1qb2 B - percentage of sequence identity: 100
1ry1 W - percentage of sequence identity: 100