PDB: 1qcs Compound: n-ethylmaleimide sensitive factor (nsf-n) Classification: FUSION PROTEIN Entry date in PDB: 1999-05-18 Resolution [Å]: 1.90 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P18708    KEYWORD: 3D-structure    ATP-binding    Endoplasmic reticulum    Golgi stack    Hydrolase    Magnesium    Metal-binding    Protein transport    Repeat    Transport    EC: 3.6.4.6 SCOP: b.52.2.3 All beta proteins    Double psi beta-barrel    ADC-like    Cdc48 N-terminal domain-like    N-terminal domain of NSF-N, NSF-Nn    Hamster (Cricetulus griseus) SCOP: d.31.1.1 Alpha and beta proteins (a+b)    Cdc48 domain 2-like    Cdc48 domain 2-like    Cdc48 domain 2-like    C-terminal domain of NSF-N, NSF-Nc    Hamster (Cricetulus griseus) GO:  ATP binding    ATP-dependent peptidase activity    nucleoside-triphosphatase activity    nucleotide binding    serine-type endopeptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1qcs_A_135 - HA => SUBCLASS : 2.1.4
1qcs_A_34 - HA => SUBCLASS : 2.2.30
1qcs_A_8 - EH => SUBCLASS : 2.1.12
1qcs_A_79 - EH => SUBCLASS : 2.2.17
1qcs_A_129 - AR => SUBCLASS : 3.3.1
1qcs_A_43 - AR => SUBCLASS : 6.4.1

Loops in ArchDB95 clusters

1qcs_A_8 - EH => SUBCLASS : 3.3.1
1qcs_A_8 - EH => SUBCLASS : 3.3.2
1qcs_A_129 - AR => SUBCLASS : 1.1.4
1qcs_A_129 - AR => SUBCLASS : 3.3.1
1qcs_A_43 - AR => SUBCLASS : 6.5.2
1qcs_A_135 - HA => SUBCLASS : 2.1.4
1qcs_A_135 - HA => SUBCLASS : 2.1.6
1qcs_A_34 - HA => SUBCLASS : 2.2.15

Loops in ArchDB-EC clusters

1qcs_A_64 - HE => SUBCLASS : 6.3.2

Loops not clustered in ArchDB

1qcs_A_185 - AR
1qcs_A_174 - AR
1qcs_A_143 - AR
1qcs_A_129 - AR
1qcs_A_97 - AR
1qcs_A_43 - AR
1qcs_A_22 - AR
1qcs_A_185 - AR
1qcs_A_174 - AR
1qcs_A_143 - AR
1qcs_A_97 - AR
1qcs_A_22 - AR
1qcs_A_111 - EH
1qcs_A_60 - EH
1qcs_A_135 - HA
1qcs_A_34 - HA
1qcs_A_119 - HE
1qcs_A_14 - HE
1qcs_A_87 - HE

1qdn A - percentage of sequence identity: 100
1qdn B - percentage of sequence identity: 100
1qdn C - percentage of sequence identity: 100