PDB: 1qdb Compound: cytochrome c nitrite reductase Classification: OXIDOREDUCTASE Entry date in PDB: 1999-08-18 Resolution [Å]: 1.90 R-Factor: 0.184

CHAIN: A SWISS-PROT/TREMBL: Q9Z4P4    KEYWORD: 3D-structure    Calcium-binding    Electron transport    Heme    Oxidoreductase    Periplasmic    Signal    EC: 1.7.2.2 SCOP: a.138.1.3 All alpha proteins    Multiheme cytochromes    Multiheme cytochromes    Di-heme elbow motif    Cytochrome c nitrite reductase    Sulfurospirillum deleyianum GO:  electron transport    nitrogen compound metabolism    CHAIN: B SWISS-PROT/TREMBL: Q9Z4P4    KEYWORD: 3D-structure    Calcium-binding    Electron transport    Heme    Oxidoreductase    Periplasmic    Signal    EC: 1.7.2.2 SCOP: a.138.1.3 All alpha proteins    Multiheme cytochromes    Multiheme cytochromes    Di-heme elbow motif    Cytochrome c nitrite reductase    Sulfurospirillum deleyianum GO:  electron transport    nitrogen compound metabolism    CHAIN: C SWISS-PROT/TREMBL: Q9Z4P4    KEYWORD: 3D-structure    Calcium-binding    Electron transport    Heme    Oxidoreductase    Periplasmic    Signal    EC: 1.7.2.2 SCOP: a.138.1.3 All alpha proteins    Multiheme cytochromes    Multiheme cytochromes    Di-heme elbow motif    Cytochrome c nitrite reductase    Sulfurospirillum deleyianum GO:  electron transport    nitrogen compound metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1qdb_A_284 - HH => SUBCLASS : 1.1.10
1qdb_A_386 - HH => SUBCLASS : 1.1.35
1qdb_A_75 - HH => SUBCLASS : 1.2.4
1qdb_A_454 - HH => SUBCLASS : 3.1.12
1qdb_A_57 - HH => SUBCLASS : 6.33.1
1qdb_A_183 - HH => SUBCLASS : 9.22.1
1qdb_A_81 - HH => SUBCLASS : 14.3.1
1qdb_A_104 - HH => SUBCLASS : 24.1.1
1qdb_A_253 - HE => SUBCLASS : 4.21.1
1qdb_A_307 - HA => SUBCLASS : 2.3.1
1qdb_A_218 - HA => SUBCLASS : 3.1.1
1qdb_A_268 - HA => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

1qdb_A_104 - HH => SUBCLASS : 24.1.1

Loops not clustered in ArchDB

1qdb_A_231 - EH
1qdb_A_276 - EH
1qdb_A_313 - EH
1qdb_A_268 - HA
1qdb_A_218 - HA
1qdb_A_307 - HA
1qdb_A_202 - HE
1qdb_A_300 - HE
1qdb_A_146 - HH
1qdb_A_465 - HH
1qdb_A_413 - HH
1qdb_A_408 - HH
1qdb_A_340 - HH
1qdb_A_328 - HH
1qdb_A_136 - HH
1qdb_A_167 - HH
1qdb_A_292 - HH

1fs7 A - percentage of sequence identity: 75
1fs8 A - percentage of sequence identity: 75
1fs9 A - percentage of sequence identity: 75
1qdb A - percentage of sequence identity: 100
1qdb B - percentage of sequence identity: 100
1qdb C - percentage of sequence identity: 100