PDB: 1qfo Compound: sialoadhesin Classification: IMMUNE SYSTEM Entry date in PDB: 1999-04-16 Resolution [Å]: 1.85 R-Factor: 0.200

CHAIN: C SWISS-PROT/TREMBL: Q62230    KEYWORD: 3D-structure    Alternative splicing    Cell adhesion    Glycoprotein    Immunoglobulin domain    Lectin    Repeat    Signal    Transmembrane    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    N-terminal domain of sialoadhesin    Mouse (Mus musculus) GO:

Image Source: PDB

Loops in ArchDB40 clusters

1qfo_A_68 - HA => SUBCLASS : 10.6.1
1qfo_A_3 - AR => SUBCLASS : 2.1.4
1qfo_A_9 - AR => SUBCLASS : 4.1.1
1qfo_A_81 - AR => SUBCLASS : 7.1.1

Loops in ArchDB95 clusters

1qfo_A_3 - AR => SUBCLASS : 2.1.2
1qfo_A_9 - AR => SUBCLASS : 4.1.1
1qfo_A_81 - AR => SUBCLASS : 7.1.1
1qfo_A_68 - HA => SUBCLASS : 10.10.1

Loops not clustered in ArchDB

1qfo_A_18 - AR
1qfo_A_23 - AR
1qfo_A_49 - AR
1qfo_A_105 - AR
1qfo_A_37 - HA
1qfo_A_92 - HA

1od7 A - percentage of sequence identity: 100
1od9 A - percentage of sequence identity: 100
1oda A - percentage of sequence identity: 100
1qfo A - percentage of sequence identity: 100
1qfo B - percentage of sequence identity: 100
1qfo C - percentage of sequence identity: 100
1qfp A - percentage of sequence identity: 100
1url A - percentage of sequence identity: 100