PDB: 1qgd Compound: transketolase Classification: TRANSFERASE Entry date in PDB: 2003-06-17 Resolution [Å]: 1.90 R-Factor: 0.132

CHAIN: A SWISS-PROT/TREMBL: P27302    KEYWORD: 3D-structure    Calcium-binding    Complete proteome    Multigene family    Thiamine pyrophosphate    Transferase    EC: 2.2.1.1 SCOP: c.36.1.6 Alpha and beta proteins (a/b)    Thiamin diphosphate-binding fold (THDP-binding)    Thiamin diphosphate-binding fold (THDP-binding)    TK-like Pyr module    Transketolase (TK), Pyr module    Escherichia coli SCOP: c.36.1.10 Alpha and beta proteins (a/b)    Thiamin diphosphate-binding fold (THDP-binding)    Thiamin diphosphate-binding fold (THDP-binding)    TK-like PP module    Transketolase (TK), PP module    Escherichia coli SCOP: c.48.1.1 Alpha and beta proteins (a/b)    TK C-terminal domain-like    TK C-terminal domain-like    Transketolase C-terminal domain-like    Transketolase (TK), C-domain    Escherichia coli GO:  transketolase activity    CHAIN: B SWISS-PROT/TREMBL: P27302    KEYWORD: 3D-structure    Calcium-binding    Complete proteome    Multigene family    Thiamine pyrophosphate    Transferase    EC: 2.2.1.1 SCOP: c.36.1.6 Alpha and beta proteins (a/b)    Thiamin diphosphate-binding fold (THDP-binding)    Thiamin diphosphate-binding fold (THDP-binding)    TK-like Pyr module    Transketolase (TK), Pyr module    Escherichia coli SCOP: c.36.1.10 Alpha and beta proteins (a/b)    Thiamin diphosphate-binding fold (THDP-binding)    Thiamin diphosphate-binding fold (THDP-binding)    TK-like PP module    Transketolase (TK), PP module    Escherichia coli SCOP: c.48.1.1 Alpha and beta proteins (a/b)    TK C-terminal domain-like    TK C-terminal domain-like    Transketolase C-terminal domain-like    Transketolase (TK), C-domain    Escherichia coli GO:  transketolase activity

Image Source: PDB

Loops in ArchDB95 clusters

1qgd_A_149 - EH => SUBCLASS : 1.1.5
1qgd_A_552 - EH => SUBCLASS : 1.3.5
1qgd_A_552 - EH => SUBCLASS : 1.3.16
1qgd_A_578 - EH => SUBCLASS : 2.1.6
1qgd_A_59 - EH => SUBCLASS : 2.1.15
1qgd_A_489 - EH => SUBCLASS : 4.5.1
1qgd_A_404 - EH => SUBCLASS : 4.76.1
1qgd_A_191 - EH => SUBCLASS : 8.33.1
1qgd_A_456 - EH => SUBCLASS : 15.3.1
1qgd_A_514 - AR => SUBCLASS : 2.1.5
1qgd_A_178 - AR => SUBCLASS : 2.8.1
1qgd_A_155 - HH => SUBCLASS : 1.1.2
1qgd_A_288 - HH => SUBCLASS : 1.1.23
1qgd_A_297 - HH => SUBCLASS : 1.2.9
1qgd_A_586 - HH => SUBCLASS : 2.1.1
1qgd_A_641 - HH => SUBCLASS : 3.28.1
1qgd_A_561 - HE => SUBCLASS : 2.1.1
1qgd_A_201 - HE => SUBCLASS : 2.1.1
1qgd_A_530 - HE => SUBCLASS : 2.5.6
1qgd_A_221 - HE => SUBCLASS : 3.4.3
1qgd_A_442 - HE => SUBCLASS : 3.5.1
1qgd_A_478 - HE => SUBCLASS : 3.7.1
1qgd_A_620 - HE => SUBCLASS : 3.11.3
1qgd_A_161 - HE => SUBCLASS : 4.7.1

Loops in ArchDB-EC clusters

1qgd_A_641 - HH => SUBCLASS : 3.15.1

Loops not clustered in ArchDB

1qgd_A_541 - AR
1qgd_A_514 - AR
1qgd_A_178 - AR
1qgd_A_541 - AR
1qgd_A_211 - EH
1qgd_A_628 - EH
1qgd_A_608 - EH
1qgd_A_522 - EH
1qgd_A_239 - EH
1qgd_A_355 - EH
1qgd_A_375 - EH
1qgd_A_428 - EH
1qgd_A_187 - HA
1qgd_A_187 - HA
1qgd_A_411 - HE
1qgd_A_594 - HE
1qgd_A_383 - HE
1qgd_A_496 - HE
1qgd_A_28 - HE
1qgd_A_118 - HE
1qgd_A_337 - HE
1qgd_A_357 - HE
1qgd_A_4 - HH
1qgd_A_319 - HH
1qgd_A_267 - HH
1qgd_A_84 - HH
1qgd_A_68 - HH

1qgd A - percentage of sequence identity: 100
1qgd B - percentage of sequence identity: 100