PDB: 1r29 Compound: b-cell lymphoma 6 protein Classification: TRANSCRIPTION Entry date in PDB: 2003-12-23 Resolution [Å]: 1.30 R-Factor: 0.131

CHAIN: A SWISS-PROT/TREMBL: P41182    KEYWORD: Activator    Chromosomal translocation    DNA-binding    Metal-binding    Nuclear protein    Polymorphism    Proto-oncogene    Repeat    Transcription regulation    Zinc-finger    SCOP: d.42.1.1 Alpha and beta proteins (a+b)    POZ domain    POZ domain    BTB/POZ domain    B-cell lymphoma 6 (Bcl6) protein BTB domain    Human (Homo sapiens) GO:  nucleus    nucleic acid binding    protein binding    zinc ion binding

Image Source: PDB

Loops in ArchDB40 clusters

1r29_A_34 - HA => SUBCLASS : 2.3.1
1r29_A_41 - EH => SUBCLASS : 1.1.1
1r29_A_71 - EH => SUBCLASS : 6.2.1
1r29_A_102 - HH => SUBCLASS : 2.2.1

Loops in ArchDB95 clusters

1r29_A_41 - EH => SUBCLASS : 1.1.1
1r29_A_41 - EH => SUBCLASS : 1.1.2
1r29_A_71 - EH => SUBCLASS : 5.3.1
1r29_A_71 - EH => SUBCLASS : 6.4.1
1r29_A_102 - HH => SUBCLASS : 2.2.1
1r29_A_55 - HE => SUBCLASS : 8.12.1
1r29_A_34 - HA => SUBCLASS : 2.3.1

Loops not clustered in ArchDB

1r29_A_14 - HE
1r29_A_47 - HH
1r29_A_80 - HH

1r28 A - percentage of sequence identity: 100
1r28 B - percentage of sequence identity: 100
1r2b A - percentage of sequence identity: 100
1r2b B - percentage of sequence identity: 100