ArchDB - Biological DataBase of Protein Loops

Information on 1r2r

PDB: 1r2r
Compound: triosephosphate isomerase
Classification: ISOMERASE
Entry date in PDB: 2003-12-23
Resolution [Å]: 1.50
R-Factor: 0.161

CHAIN: A

SWISS-PROT/TREMBL: P00939
   KEYWORD: Fatty acid biosynthesis    Gluconeogenesis    Glycolysis    Isomerase    Pentose shunt
EC: 5.3.1.1
SCOP: c.1.1.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Triosephosphate isomerase (TIM)    Triosephosphate isomerase (TIM)    Triosephosphate isomerase    Rabbit (Oryctolagus cuniculus)
GO:  triose-phosphate isomerase activity    metabolism

CHAIN: B

CHAIN: C

CHAIN: D

Image Source: PDB

Stored Loops of 1r2r

Loops in ArchDB95 clusters

1r2r_A_37 - EH => SUBCLASS : 1.1.10
1r2r_A_206 - EH => SUBCLASS : 4.34.2
1r2r_A_206 - EH => SUBCLASS : 5.29.2
1r2r_A_6 - EH => SUBCLASS : 6.17.1
1r2r_A_160 - EH => SUBCLASS : 12.1.1
1r2r_A_60 - EH => SUBCLASS : 16.2.1
1r2r_A_178 - HH => SUBCLASS : 1.2.16
1r2r_A_131 - HH => SUBCLASS : 1.3.2
1r2r_A_96 - HH => SUBCLASS : 3.1.3

Loops not clustered in ArchDB

1r2r_A_90 - EH
1r2r_A_122 - EH
1r2r_A_228 - EH
1r2r_A_198 - HE
1r2r_A_139 - HE
1r2r_A_106 - HE
1r2r_A_80 - HE
1r2r_A_48 - HE
1r2r_A_18 - HE
1r2r_A_217 - HE

Homologous structures to 1r2r classified in ArchDB

1hti A - percentage of sequence identity: 98
1hti B - percentage of sequence identity: 98
1mo0 A - percentage of sequence identity: 62
1mo0 B - percentage of sequence identity: 62
1r2r A - percentage of sequence identity: 100
1r2r B - percentage of sequence identity: 100
1r2r C - percentage of sequence identity: 100
1r2r D - percentage of sequence identity: 100
1r2s A - percentage of sequence identity: 100
1r2s B - percentage of sequence identity: 100
1r2s C - percentage of sequence identity: 100
1r2s D - percentage of sequence identity: 100
1r2t A - percentage of sequence identity: 100
1r2t B - percentage of sequence identity: 100
1spq A - percentage of sequence identity: 88
1spq B - percentage of sequence identity: 88
1sq7 A - percentage of sequence identity: 88
1sq7 B - percentage of sequence identity: 88
1ssd A - percentage of sequence identity: 88
1ssd B - percentage of sequence identity: 88
1ssg A - percentage of sequence identity: 88
1ssg B - percentage of sequence identity: 88
1su5 A - percentage of sequence identity: 88
1su5 B - percentage of sequence identity: 88
1sw0 A - percentage of sequence identity: 88
1sw0 B - percentage of sequence identity: 88
1sw3 A - percentage of sequence identity: 88
1sw3 B - percentage of sequence identity: 88
1sw7 A - percentage of sequence identity: 88
1sw7 B - percentage of sequence identity: 88
1tim A - percentage of sequence identity: 86
1tim B - percentage of sequence identity: 86
1tpb 1 - percentage of sequence identity: 88
1tpb 2 - percentage of sequence identity: 88
1tpc 1 - percentage of sequence identity: 88
1tpc 2 - percentage of sequence identity: 88
1tph 1 - percentage of sequence identity: 88
1tph 2 - percentage of sequence identity: 88
1tpu A - percentage of sequence identity: 88
1tpu B - percentage of sequence identity: 88
1tpv A - percentage of sequence identity: 88
1tpv B - percentage of sequence identity: 88
1tpw A - percentage of sequence identity: 88
1tpw B - percentage of sequence identity: 88
1wyi A - percentage of sequence identity: 98
1wyi B - percentage of sequence identity: 98
8tim A - percentage of sequence identity: 88
8tim B - percentage of sequence identity: 88