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Information on 1r5y
PDB: 1r5y
Compound: queuine trna-ribosyltransferase
Classification: TRANSFERASE
Entry date in PDB: 2004-04-13
Resolution [Å]: 1.20
R-Factor: 0.172


CHAIN: A
SWISS-PROT/TREMBL: P28720
   KEYWORD: 3D-structure    Glycosyltransferase    Queuosine biosynthesis    Transferase    tRNA processing    Zinc   
EC: 2.4.2.29
SCOP: c.1.20.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    tRNA-guanine transglycosylase    tRNA-guanine transglycosylase    Queosine tRNA-guanine transglycosylase    Zymomonas mobilis
GO:  queuine tRNA-ribosyltransferase activity    queuosine biosynthesis    tRNA modification   
1r5y Image
Image Source: PDB

Stored Loops of 1r5y

Loops in ArchDB40 clusters

1r5y_A_116 - HA => SUBCLASS : 2.2.2
1r5y_A_25 - HA => SUBCLASS : 2.2.2
1r5y_A_292 - HA => SUBCLASS : 6.7.1
1r5y_A_165 - HH => SUBCLASS : 1.1.10
1r5y_A_165 - HH => SUBCLASS : 1.2.22

Loops in ArchDB95 clusters

1r5y_A_165 - HH => SUBCLASS : 1.1.60
1r5y_A_190 - HE => SUBCLASS : 0.1.1
1r5y_A_265 - HE => SUBCLASS : 3.3.3
1r5y_A_116 - HA => SUBCLASS : 2.2.2
1r5y_A_292 - HA => SUBCLASS : 2.2.2
1r5y_A_25 - HA => SUBCLASS : 2.2.2

Loops not clustered in ArchDB

1r5y_A_35 - AR
1r5y_A_197 - EH
1r5y_A_257 - EH
1r5y_A_225 - EH
1r5y_A_300 - EH
1r5y_A_151 - EH
1r5y_A_121 - EH
1r5y_A_99 - EH
1r5y_A_67 - EH
1r5y_A_41 - EH
1r5y_A_278 - EH
1r5y_A_15 - HA
1r5y_A_283 - HE
1r5y_A_237 - HE
1r5y_A_208 - HE
1r5y_A_137 - HE
1r5y_A_105 - HE
1r5y_A_89 - HE
1r5y_A_56 - HE
1r5y_A_71 - HH
1r5y_A_80 - HH
1r5y_A_321 - HH
1r5y_A_328 - HH
1r5y_A_340 - HH

Homologous structures to 1r5y classified in ArchDB

1efz A - percentage of sequence identity: 99
1enu A - percentage of sequence identity: 100
1f3e A - percentage of sequence identity: 100
1k4h A - percentage of sequence identity: 100
1n2v A - percentage of sequence identity: 100
1ozm A - percentage of sequence identity: 99
1ozq A - percentage of sequence identity: 99
1p0b A - percentage of sequence identity: 100
1p0d A - percentage of sequence identity: 100
1p0e A - percentage of sequence identity: 100
1pud - - percentage of sequence identity: 100
1pxg A - percentage of sequence identity: 99
1q2r A - percentage of sequence identity: 100
1q2r B - percentage of sequence identity: 100
1q2r C - percentage of sequence identity: 100
1q2r D - percentage of sequence identity: 100
1q2s A - percentage of sequence identity: 100
1q2s B - percentage of sequence identity: 100
1q2s C - percentage of sequence identity: 100
1q2s D - percentage of sequence identity: 100
1q4w A - percentage of sequence identity: 100
1q63 A - percentage of sequence identity: 100
1q65 A - percentage of sequence identity: 100
1q66 A - percentage of sequence identity: 100
1s38 A - percentage of sequence identity: 100
1s39 A - percentage of sequence identity: 100
1wkd - - percentage of sequence identity: 99
1wke - - percentage of sequence identity: 99
1wkf - - percentage of sequence identity: 99
1y5v A - percentage of sequence identity: 100
1y5w A - percentage of sequence identity: 100
1y5x A - percentage of sequence identity: 100
1y5x D - percentage of sequence identity: 100