PDB: 1rfn Compound: coagulation factor ix Classification: COAGULATION FACTOR Entry date in PDB: 1999-09-01 Resolution [Å]: 2.80 R-Factor: 0.216

CHAIN: A SWISS-PROT/TREMBL: P00740    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Pharmaceutical    Phosphorylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Sulfation    Vitamin K    Zymogen    EC: 3.4.21.22 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Coagulation factor IXa, protease domain    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P00740    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Pharmaceutical    Phosphorylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Sulfation    Vitamin K    Zymogen    EC: 3.4.21.22 SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor IX (IXa)    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB-EC clusters

1rfn_A_165 - HE => SUBCLASS : 8.4.1

Loops not clustered in ArchDB

1rfn_A_180 - AR
1rfn_A_51 - AR
1rfn_B_107 - AR
1rfn_A_20 - AR
1rfn_A_104 - EH
1rfn_A_226 - EH
1rfn_A_156 - EH
1rfn_A_207 - HA
1rfn_A_198 - HA
1rfn_B_98 - HA
1rfn_A_135 - HA
1rfn_A_81 - HA
1rfn_A_65 - HA
1rfn_A_42 - HA
1rfn_A_30 - HA
1rfn_B_115 - HA
1rfn_A_126 - HE

1x7a C - percentage of sequence identity: 88