PDB: 1s5d Compound: cholera enterotoxin, a chain Classification: TRANSERASE,TOXIN Entry date in PDB: 2004-04-06 Resolution [Å]: 1.75 R-Factor: 0.163

CHAIN: A SWISS-PROT/TREMBL: P01555    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Glycosyltransferase    NAD    Signal    Transferase    EC: 2.4.2.36 SCOP: d.166.1.1 Alpha and beta proteins (a+b)    ADP-ribosylation    ADP-ribosylation    ADP-ribosylating toxins    Cholera toxin    Vibrio cholerae GO:  extracellular region    catalytic activity    pathogenesis    CHAIN: D SWISS-PROT/TREMBL: P01556    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Membrane    Signal    SCOP: b.40.2.1 All beta proteins    OB-fold    Bacterial enterotoxins    Bacterial AB5 toxins, B-subunits    Cholera toxin    Vibrio cholerae GO:  extracellular region    pathogenesis    CHAIN: E SWISS-PROT/TREMBL: P01556    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Membrane    Signal    SCOP: b.40.2.1 All beta proteins    OB-fold    Bacterial enterotoxins    Bacterial AB5 toxins, B-subunits    Cholera toxin    Vibrio cholerae GO:  extracellular region    pathogenesis    CHAIN: F SWISS-PROT/TREMBL: P01556    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Membrane    Signal    SCOP: b.40.2.1 All beta proteins    OB-fold    Bacterial enterotoxins    Bacterial AB5 toxins, B-subunits    Cholera toxin    Vibrio cholerae GO:  extracellular region    pathogenesis    CHAIN: G SWISS-PROT/TREMBL: P01556    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Membrane    Signal    SCOP: b.40.2.1 All beta proteins    OB-fold    Bacterial enterotoxins    Bacterial AB5 toxins, B-subunits    Cholera toxin    Vibrio cholerae GO:  extracellular region    pathogenesis    CHAIN: H SWISS-PROT/TREMBL: P01556    KEYWORD: 3D-structure    Complete proteome    Enterotoxin    Membrane    Signal    SCOP: b.40.2.1 All beta proteins    OB-fold    Bacterial enterotoxins    Bacterial AB5 toxins, B-subunits    Cholera toxin    Vibrio cholerae GO:  extracellular region    pathogenesis

Image Source: PDB

Loops in ArchDB40 clusters

1s5d_A_66 - HE => SUBCLASS : 4.13.1
1s5d_A_124 - HA => SUBCLASS : 2.1.1
1s5d_A_82 - AR => SUBCLASS : 1.1.9
1s5d_A_134 - AR => SUBCLASS : 3.2.2
1s5d_A_119 - AR => SUBCLASS : 3.4.1
1s5d_A_134 - AR => SUBCLASS : 4.5.1

Loops in ArchDB95 clusters

1s5d_A_59 - EH => SUBCLASS : 2.1.6
1s5d_A_4 - EH => SUBCLASS : 3.4.3
1s5d_A_140 - EH => SUBCLASS : 5.1.4
1s5d_A_119 - AR => SUBCLASS : 3.2.2
1s5d_A_134 - AR => SUBCLASS : 3.7.1
1s5d_A_82 - AR => SUBCLASS : 4.12.2
1s5d_A_66 - HE => SUBCLASS : 4.25.1
1s5d_A_124 - HA => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1s5d_A_113 - AR
1s5d_A_21 - EH
1s5d_A_94 - EH
1s5d_A_13 - HE
1s5d_A_41 - HE
1s5d_A_97 - HE
1s5d_A_147 - HH

1djr D - percentage of sequence identity: 82
1htl A - percentage of sequence identity: 86
1htl C - percentage of sequence identity: 61
1lt3 A - percentage of sequence identity: 80
1lt4 A - percentage of sequence identity: 78
1lta A - percentage of sequence identity: 87
1lta C - percentage of sequence identity: 61
1ltb A - percentage of sequence identity: 87
1ltb C - percentage of sequence identity: 60
1ltg A - percentage of sequence identity: 86
1ltg C - percentage of sequence identity: 61
1lti A - percentage of sequence identity: 86
1lti C - percentage of sequence identity: 65
1lts C - percentage of sequence identity: 65
1ltt A - percentage of sequence identity: 87
1ltt C - percentage of sequence identity: 65
1s5b A - percentage of sequence identity: 100
1s5c A - percentage of sequence identity: 100
1s5e A - percentage of sequence identity: 99
1s5e B - percentage of sequence identity: 99
1s5f A - percentage of sequence identity: 99
1xtc C - percentage of sequence identity: 100
2a5d B - percentage of sequence identity: 97
2a5f B - percentage of sequence identity: 97
2a5g B - percentage of sequence identity: 97
3chb D - percentage of sequence identity: 99