PDB: 1vf6 Compound: pals1-associated tight junction protein Classification: PROTEIN BINDING/PROTEIN TRANSPORT Entry date in PDB: 2004-04-20 Resolution [Å]: 2.10 R-Factor: 0.242

CHAIN: C SWISS-PROT/TREMBL: Q9JLB2    KEYWORD: Membrane    SH3 domain    Membrane    SH3 domain    SCOP: a.194.1.1 All alpha proteins    L27 domain    L27 domain    L27 domain    Maguk p55 subfamily member 5, Patj    Mouse (Mus musculus) GO:  protein binding    CHAIN: D SWISS-PROT/TREMBL: Q9JLB2    KEYWORD: Membrane    SH3 domain    SCOP: a.194.1.1 All alpha proteins    L27 domain    L27 domain    L27 domain    Maguk p55 subfamily member 5, Patj    Mouse (Mus musculus) GO:  protein binding

Image Source: PDB

Loops in ArchDB40 clusters

1vf6_A_13 - HH => SUBCLASS : 2.4.4

Loops in ArchDB95 clusters

1vf6_A_13 - HH => SUBCLASS : 2.5.4
1vf6_C_122 - HH => SUBCLASS : 3.3.3
1vf6_C_122 - HH => SUBCLASS : 3.3.6

Loops not clustered in ArchDB

1vf6_A_32 - HH
1vf6_C_141 - HH

1c0b A - percentage of sequence identity: 100
1c0c A - percentage of sequence identity: 100
1vf6 A - percentage of sequence identity: 100
1vf6 B - percentage of sequence identity: 100
1y76 A - percentage of sequence identity: 89
1y76 C - percentage of sequence identity: 89
null nu - percentage of sequence identity: 0