PDB: 1zip Compound: adenylate kinase Classification: PHOSPHOTRANSFERASE Entry date in PDB: 1997-08-20 Resolution [Å]: 1.85 R-Factor: 0.156

CHAIN: - SWISS-PROT/TREMBL: P27142    KEYWORD: 3D-structure    ATP-binding    Kinase    Transferase    EC: 2.7.4.3 SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Bacillus stearothermophilus SCOP: c.37.1.1 Alpha and beta proteins (a/b)    P-loop containing nucleoside triphosphate hydrolases    P-loop containing nucleoside triphosphate hydrolases    Nucleotide and nucleoside kinases    Adenylate kinase    Bacillus stearothermophilus SCOP: g.41.2.1 Small proteins    Rubredoxin-like    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Microbial and mitochondrial ADK, insert "zinc finger" domain    Bacillus stearothermophilus GO:  adenylate kinase activity    ATP binding    nucleotide kinase activity    phosphotransferase activity, phosphate group as acceptor    nucleobase, nucleoside, nucleotide and nucleic acid metabolism

Image Source: PDB

Loops in ArchDB-KI clusters

1zip_*_28 - EH => SUBCLASS : 0.1.1
1zip_*_109 - EH => SUBCLASS : 1.1.1
1zip_*_192 - EH => SUBCLASS : 4.1.1
1zip_*_81 - EH => SUBCLASS : 5.1.1
1zip_*_2 - EH => SUBCLASS : 6.1.1
1zip_*_127 - HA => SUBCLASS : 4.1.1
1zip_*_117 - HE => SUBCLASS : 0.1.1
1zip_*_181 - HE => SUBCLASS : 2.4.1
1zip_*_13 - HE => SUBCLASS : 3.3.2
1zip_*_90 - HE => SUBCLASS : 5.1.1
1zip_*_61 - HE => SUBCLASS : 7.1.1
1zip_*_31 - HH => SUBCLASS : 2.4.1
1zip_*_44 - HH => SUBCLASS : 5.1.1

Loops not clustered in ArchDB-KI

1zip_*_136 - AR
1zip_*_157 - EH
1zip_*_165 - HH

1p3j A - percentage of sequence identity: 74
1s3g A - percentage of sequence identity: 67
1zin - - percentage of sequence identity: 100