PDB: 2gdm Compound: leghemoglobin (oxy) Classification: OXYGEN TRANSPORT Entry date in PDB: 1995-10-15 Resolution [Å]: 1.70 R-Factor: 0.158

CHAIN: - SWISS-PROT/TREMBL: P02240    KEYWORD: 3D-structure    Heme    Multigene family    Nitrogen fixation    Oxygen transport    Transport    SCOP: a.1.1.2 All alpha proteins    Globin-like    Globin-like    Globins    Leghemoglobin    Yellow lupin (Lupinus luteus) GO:  binding    heme binding    oxygen binding    oxygen transport    transport

Image Source: PDB

Loops in ArchDB40 clusters

2gdm_*_5 - HH => SUBCLASS : 1.2.6
2gdm_*_88 - HH => SUBCLASS : 3.23.1
2gdm_*_107 - HH => SUBCLASS : 5.8.1

Loops in ArchDB95 clusters

2gdm_*_5 - HH => SUBCLASS : 1.2.3
2gdm_*_88 - HH => SUBCLASS : 3.1.1
2gdm_*_107 - HH => SUBCLASS : 5.5.1

Loops not clustered in ArchDB

2gdm_*_22 - HH
2gdm_*_58 - HH

1gdi - - percentage of sequence identity: 100
1gdj - - percentage of sequence identity: 100
1gdk - - percentage of sequence identity: 100
1gdl - - percentage of sequence identity: 100
1lh1 - - percentage of sequence identity: 100
1lh2 - - percentage of sequence identity: 100
1lh3 - - percentage of sequence identity: 100
1lh5 - - percentage of sequence identity: 100
1lh6 - - percentage of sequence identity: 100
1lh7 - - percentage of sequence identity: 100
2lh1 - - percentage of sequence identity: 100
2lh2 - - percentage of sequence identity: 100
2lh3 - - percentage of sequence identity: 100
2lh5 - - percentage of sequence identity: 100
2lh6 - - percentage of sequence identity: 100
2lh7 - - percentage of sequence identity: 100