ArchDB - Biological DataBase of Protein Loops

Information on 3pcc

PDB: 3pcc
Compound: protocatechuate 3,4-dioxygenase
Classification: DIOXYGENASE
Entry date in PDB: 1998-04-29
Resolution [Å]: 1.98
R-Factor: 0.163

CHAIN: A

SWISS-PROT/TREMBL: P00436
   KEYWORD: 3D-structure    Aromatic hydrocarbons catabolism    Dioxygenase    Iron    Oxidoreductase
EC: 1.13.11.3
SCOP: b.3.6.1 All beta proteins    Prealbumin-like    Aromatic compound dioxygenase    Aromatic compound dioxygenase    Protocatechuate-3,4-dioxygenase, alpha chain    Pseudomonas aeruginosa
GO:  catalytic activity    ferric iron binding    aromatic compound metabolism

CHAIN: B

CHAIN: C

CHAIN: D

CHAIN: E

CHAIN: F

CHAIN: M

SWISS-PROT/TREMBL: P00437
   KEYWORD: 3D-structure    Aromatic hydrocarbons catabolism    Dioxygenase    Iron    Oxidoreductase
EC: 1.13.11.3
SCOP: b.3.6.1 All beta proteins    Prealbumin-like    Aromatic compound dioxygenase    Aromatic compound dioxygenase    Protocatechuate-3,4-dioxygenase, beta chain    Pseudomonas aeruginosa
GO:  catalytic activity    ferric iron binding    aromatic compound metabolism

CHAIN: N

CHAIN: O

CHAIN: P

CHAIN: Q

CHAIN: R

Image Source: PDB

Stored Loops of 3pcc

Loops in ArchDB95 clusters

3pcc_A_139 - EH => SUBCLASS : 1.1.12
3pcc_A_103 - AR => SUBCLASS : 4.24.2
3pcc_M_426 - AR => SUBCLASS : 5.8.1
3pcc_M_498 - HE => SUBCLASS : 0.1.10
3pcc_A_164 - HE => SUBCLASS : 0.1.12
3pcc_A_114 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

3pcc_A_48 - AR
3pcc_M_436 - AR
3pcc_M_519 - AR
3pcc_M_377 - AR
3pcc_A_180 - AR
3pcc_M_525 - AR
3pcc_A_121 - AR
3pcc_A_92 - AR
3pcc_M_455 - AR
3pcc_M_306 - EH
3pcc_M_474 - EH
3pcc_M_505 - HA
3pcc_M_460 - HA
3pcc_M_447 - HA
3pcc_M_396 - HA
3pcc_A_171 - HA
3pcc_A_125 - HA
3pcc_A_67 - HA
3pcc_A_17 - HE
3pcc_M_343 - HE
3pcc_A_149 - HH

Homologous structures to 3pcc classified in ArchDB

1ykk A - percentage of sequence identity: 100
1ykk C - percentage of sequence identity: 100
1ykk E - percentage of sequence identity: 100
1ykk G - percentage of sequence identity: 100
1ykk I - percentage of sequence identity: 100
1ykk K - percentage of sequence identity: 100
1ykl A - percentage of sequence identity: 100
1ykl C - percentage of sequence identity: 100
1ykl E - percentage of sequence identity: 100
1ykl G - percentage of sequence identity: 100
1ykl I - percentage of sequence identity: 100
1ykl K - percentage of sequence identity: 100
1ykm A - percentage of sequence identity: 100
1ykm C - percentage of sequence identity: 100
1ykm E - percentage of sequence identity: 100
1ykm G - percentage of sequence identity: 100
1ykm I - percentage of sequence identity: 100
1ykm K - percentage of sequence identity: 100
1ykn A - percentage of sequence identity: 100
1ykn C - percentage of sequence identity: 100
1ykn E - percentage of sequence identity: 100
1ykn G - percentage of sequence identity: 100
1ykn I - percentage of sequence identity: 100
1ykn K - percentage of sequence identity: 100
1yko A - percentage of sequence identity: 100
1yko C - percentage of sequence identity: 100
1yko E - percentage of sequence identity: 100
1yko G - percentage of sequence identity: 100
1yko I - percentage of sequence identity: 100
1yko K - percentage of sequence identity: 100
1ykp A - percentage of sequence identity: 100
1ykp C - percentage of sequence identity: 100
1ykp E - percentage of sequence identity: 100
1ykp G - percentage of sequence identity: 100
1ykp I - percentage of sequence identity: 100
1ykp K - percentage of sequence identity: 100
2pcd A - percentage of sequence identity: 100
2pcd B - percentage of sequence identity: 100
2pcd C - percentage of sequence identity: 100
2pcd D - percentage of sequence identity: 100
2pcd E - percentage of sequence identity: 100
2pcd F - percentage of sequence identity: 100
3pca A - percentage of sequence identity: 100
3pca B - percentage of sequence identity: 100
3pca C - percentage of sequence identity: 100
3pca D - percentage of sequence identity: 100
3pca E - percentage of sequence identity: 100
3pca F - percentage of sequence identity: 100
3pcb A - percentage of sequence identity: 100
3pcb B - percentage of sequence identity: 100
3pcb C - percentage of sequence identity: 100
3pcb D - percentage of sequence identity: 100
3pcb E - percentage of sequence identity: 100
3pcb F - percentage of sequence identity: 100
3pcc A - percentage of sequence identity: 100
3pcc B - percentage of sequence identity: 100
3pcc C - percentage of sequence identity: 100
3pcc D - percentage of sequence identity: 100
3pcc E - percentage of sequence identity: 100
3pcc F - percentage of sequence identity: 100
3pcd A - percentage of sequence identity: 100
3pcd B - percentage of sequence identity: 100
3pcd C - percentage of sequence identity: 100
3pcd D - percentage of sequence identity: 100
3pcd E - percentage of sequence identity: 100
3pcd F - percentage of sequence identity: 100
3pce A - percentage of sequence identity: 100
3pce B - percentage of sequence identity: 100
3pce C - percentage of sequence identity: 100
3pce D - percentage of sequence identity: 100
3pce E - percentage of sequence identity: 100
3pce F - percentage of sequence identity: 100
3pcf A - percentage of sequence identity: 100
3pcf B - percentage of sequence identity: 100
3pcf C - percentage of sequence identity: 100
3pcf D - percentage of sequence identity: 100
3pcf E - percentage of sequence identity: 100
3pcf F - percentage of sequence identity: 100
3pcg A - percentage of sequence identity: 100
3pcg B - percentage of sequence identity: 100
3pcg C - percentage of sequence identity: 100
3pcg D - percentage of sequence identity: 100
3pcg E - percentage of sequence identity: 100
3pcg F - percentage of sequence identity: 100
3pcg M - percentage of sequence identity: 100
3pch A - percentage of sequence identity: 100
3pch B - percentage of sequence identity: 100
3pch C - percentage of sequence identity: 100
3pch D - percentage of sequence identity: 100
3pch E - percentage of sequence identity: 100
3pch F - percentage of sequence identity: 100
3pci A - percentage of sequence identity: 100
3pci B - percentage of sequence identity: 100
3pci C - percentage of sequence identity: 100
3pci D - percentage of sequence identity: 100
3pci E - percentage of sequence identity: 100
3pci F - percentage of sequence identity: 100
3pcj A - percentage of sequence identity: 100
3pcj B - percentage of sequence identity: 100
3pcj C - percentage of sequence identity: 100
3pcj D - percentage of sequence identity: 100
3pcj E - percentage of sequence identity: 100
3pcj F - percentage of sequence identity: 100
3pck A - percentage of sequence identity: 100
3pck B - percentage of sequence identity: 100
3pck C - percentage of sequence identity: 100
3pck D - percentage of sequence identity: 100
3pck E - percentage of sequence identity: 100
3pck F - percentage of sequence identity: 100
3pcl A - percentage of sequence identity: 100
3pcl B - percentage of sequence identity: 100
3pcl C - percentage of sequence identity: 100
3pcl D - percentage of sequence identity: 100
3pcl E - percentage of sequence identity: 100
3pcl F - percentage of sequence identity: 100
3pcm A - percentage of sequence identity: 100
3pcm B - percentage of sequence identity: 100
3pcm C - percentage of sequence identity: 100
3pcm D - percentage of sequence identity: 100
3pcm E - percentage of sequence identity: 100
3pcm F - percentage of sequence identity: 100
3pcn A - percentage of sequence identity: 100
3pcn B - percentage of sequence identity: 100
3pcn C - percentage of sequence identity: 100
3pcn D - percentage of sequence identity: 100
3pcn E - percentage of sequence identity: 100
3pcn F - percentage of sequence identity: 100