Logo
Information on SUBCLASS 1.2.8
Subclass Accession number: 3660
Subclass: 1.2.8 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 21

Average sequence ID (%) : 6.7 +/- 12.1
Average RMSD (Å) : 0.638 +/- 0.196

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XhpXX
(φψ)-conformation: bbabb
Pattern: xx[agilmvy][adeknqst][adgknqrst]xxx
Conservation:-0.753-1.1240.6580.9350.035-1.0651.314-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b9m_A_2011b9m   A205212GIISHIEREE---EEEbbxabbbb
1cbg_*_3201cbg   -323330LNYYSSYYEE---EEEbbbabbbx
1dun_*_341dun   -3744IPTDVKIQEE---EEExxbaxbbb
1dv1_A_3521dv1   A352358GKITRFH.EE---EE.exxabbb.
1euc_B_981euc   B98105VKVNKVMVEE---EEEbpbabbbb
1f7d_A_181f7d   A2027LLAAKEIHEE-SS-EEbbxabxbb
1hpg_A_1211hpg   A122127QDISSA..EE--EE..bxbabb..
1ia9_A_15981ia9   A15991606SWSQLGLCEE-SS-EEbxxaxxbx
1ih7_A_4021ih7   A402409NRYKYVMSEE-SSEEEexbabbbb
1izd_A_2031izd   A203210DSSSDSITEEE---EExxbaxxbb
1k5c_A_421k5c   A4350VTMAGDITEEE-S-EEbbxabxbb
1p2z_A_1801p2z   A180186LSGETIT.EE-S-EE.xxbabbb.
1p30_A_1731p30   A173179YSGINIT.EE-S-EE.xbbabbb.
1rmg_*_591rmg   -6067YALNTWVTEEE-S-EEbbbabxbb
1s18_A_2101s18   A211218LIHESACWEE---EEEbbbabbbb
1tgj_*_951tgj   -104111MVVKSCKCEEE-BEEEabxabbbb
1ug6_A_2781ug6   A281288VNYYAPVREEES--EEbbbabxbb
2pii_*_912pii   -94100FDVARVI.EE-S-EE.bxbabbb.
2scu_B_912scu   B9198QPVNQILVEE---EEEbxxabbbb
2sfa_*_882sfa   -8994RDITGA..EE--EE..bxxabb..
2tgi_*_952tgi   -104111MIVKSCKCEEE--EEEabxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b9m_A_2011b9m   A     MSESELENOMETHIONINE L - 203
1b9m_A_2011b9m   A     MSESELENOMETHIONINE P - 204
1b9m_A_2011b9m   A     MSESELENOMETHIONINE G - 205
1b9m_A_2011b9m   A     MSESELENOMETHIONINE I - 206
1b9m_A_2011b9m   A     MSESELENOMETHIONINE I - 207
1b9m_A_2011b9m   A     MSESELENOMETHIONINE S - 208
1b9m_A_2011b9m   A     MSESELENOMETHIONINE H - 209
1ia9_A_15981ia9   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE K - 1608
1rmg_*_591rmg   *     NAGN-ACETYL-D-GLUCOSAMINE N - 59
1s18_A_2101s18   A     CACALCIUM ION E - 214
1s18_A_2101s18   A     CACALCIUM ION S - 215
1s18_A_2101s18   A     TMNTRIS(HYDROXYMETHYL)AMINOMETHANE C - 217
1s18_A_2101s18   A     TMNTRIS(HYDROXYMETHYL)AMINOMETHANE W - 218
1tgj_*_951tgj   *     DIO1,4-DIETHYLENE DIOXIDE E - 99
1tgj_*_951tgj   *     DIO1,4-DIETHYLENE DIOXIDE L - 101
1ug6_A_2781ug6   A     GOLGLYCEROL N - 282
1ug6_A_2781ug6   A     GOLGLYCEROL Y - 284

Clusters included in this Subclass
CLUSTER: AR.2.38
CLUSTER: AR.3.20