Information on SUBCLASS 2.8.4 |
Subclass Accession number: 3731
Subclass: 2.8.4 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) 3.2.1.8 GO : GO:0004553 (>50 %) GO:0016798 (>50 %) SCOP : 51350 (>50 %) 51445 (>50 %) 51487 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 23.8 +/- 20.7 Average RMSD (Å) : 0.533 +/- 0.231 Consensus geometry
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Consensus Sequence: | XXXpph |
(φψ)-conformation: | bbalpb |
Pattern: | [IV] | x | x | x | [STY] | [EH] | [FL] |
Conservation: | 1.031 | 0.107 | -0.640 | -1.177 | -1.134 | 1.224 | 0.590 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i1w_A_203 | 1i1w | A | 204 | 210 | IGSQTHL | EEE--EE | bbbavxb |
1l2l_A_178 | 1l2l | A | 178 | 184 | IHYIYEF | EEE--EE | xbxalxb |
1od8_A_201 | 1od8 | A | 202 | 208 | VGFQSHF | EEE--EE | bbbavxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1w_A_203 | 1i1w | A | GOLGLYCEROL | Q - 207 |
1i1w_A_203 | 1i1w | A | GOLGLYCEROL | H - 209 |
1od8_A_201 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | Q - 205 |
1od8_A_201 | 1od8 | A | IMDIMIDAZOLE | Q - 205 |
1od8_A_201 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | H - 207 |
1od8_A_201 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | H - 207 |
1od8_A_201 | 1od8 | A | IMDIMIDAZOLE | H - 207 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od8_A_201 | 1od8 | A | AC8IMD BINDING SITE FOR CHAIN A | Q - 205 |
Clusters included in this Subclass |
CLUSTER: AR.1.67 |