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PDB code:

Information on SUBCLASS 3.5.2

Subclass Accession number: 3796 Subclass: 3.5.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 29 Average sequence ID (%) : 14.9 +/- 16.8 Average RMSD (Å) : 0.579 +/- 0.227 Consensus geometry d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aoz_A_419	1aoz	A	419	428	.YQFKIGEVVD	.EEE-TT-EEE	.xbbxxgxxbb
1ay1_H_11	1ay1	H	11	19	..LVKPYQSLS	..EE-TTS-EE	..bbxxvxbbb
1bdy_A_58	1bdy	A	60	70	DAHIYEGRVIQ	EEE--TT-EEE	bbxxbxvxbbb
1bxu_A_18	1bxu	A	18	28	TIEIQAGDTVQ	EEEE-TT-EEE	bbbbbpvxbbb
1ciu_*_508	1ciu	-	508	516	..MTKAGQTIT	..EE-TT-EEE	..bbbpvxbbb
1e2w_A_38	1e2w	A	38	46	..AVLPDTVFE	..EE-TT-EEE	..bbxxlbxbb
1flt_X_144	1flt	X	145	155	IIHMTEGRELV	EEEE-TTS-EE	xbxbbpvbxbb
1gtt_A_52	1gtt	A	52	61	.IPFPQGEKVL	.EEE-TT--EE	.xxxxxgxbbb
1ivl_A_10	1ivl	A	10	20	TLSVTPGNSVS	EEEE-TT-EEE	bbbbbpvxbbb
1kya_A_371	1kya	A	371	381	VYSLPSNADIE	EEEE-SS-EEE	bbxbxxlbxbb
1m4k_A_117	1m4k	A	117	125	..TVLAGESVT	..EE-TTSEEE	..bbxpvxxbb
1nkr_*_117	1nkr	-	117	125	..TVLAGENVT	..EE-TT-EEE	..bbxpgxxxb
1o4t_A_93	1o4t	A	93	103	VCFTDSGESHS	EEEE-TT-EEE	bbbbxpvxbbb
1oaq_L_9	1oaq	L	9	19	ALTTSPGETVT	EEEE-TT-EEE	bbbbbpvxxbb
1od5_A_121	1od5	A	122	132	VLVIPPGVPYW	EEEE-TT--EE	bbbbxpvbwbb
1paz_*_22	1paz	-	22	32	YIKANPGDTVT	EEEE-TT-EEE	bbbbbpvxbbb
1plc_*_18	1plc	-	18	28	EFSISPGEKIV	EEEE-TT-EEE	bbbbxpvxxbb
1pmy_*_22	1pmy	-	22	32	LVRLKPGDSIK	EEEE-TT-EEE	bbbbbpgxbbb
1qwr_A_153	1qwr	A	156	166	RIKIKPGDFYY	EEE--TT-EEE	bbxbbpvxbbx
1suu_A_651	1suu	A	654	664	AEIVFKDEKVI	EEEE-TT-EEE	bbbbbpvxxbx
1uol_A_132	1uol	A	132	142	KLFCQLAKTCP	EEEE-TT--EE	bxbbxplxxbw
1uxz_A_29	1uxz	A	31	41	VGYIDAGDWLS	EE---TT-EEE	xblxbpgxbbb
1xnb_*_163	1xnb	-	169	179	MATEGYQSSGS	EEEEEES-EEE	xbbbbblbbeb
1ygs_*_427	1ygs	-	427	436	.HKIYPSAYIK	.EEE-TT-EEE	.bxbxpvxbbx
1zxq_*_99	1zxq	-	99	107	..LVAVGKSFT	..EE-TTSEEE	..bbxpvbxbb
2bbk_H_57	2bbk	H	61	71	MIDGGFLPNPV	EEEE-SS-EEE	bbxbFxlxbwb
2plt_*_18	2plt	-	18	28	TLTIKSGETVN	EEEE-TT-EEE	bbbbxpvxbbb
2reb_*_56	2reb	-	56	63	...LPMGRIVE	...EETTSEEE	...xxxvbxbb
7pcy_*_18	7pcy	-	18	28	NITVGAGESIE	EEEE-TT-EEE	bbbbxxvxxbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1kya_A_371	1kya	A	NAGN-ACETYL-D-GLUCOSAMINE	E - 381
1kya_A_371	1kya	A	NAGN-ACETYL-D-GLUCOSAMINE	S - 383
1o4t_A_93	1o4t	A	MNMANGANESE (II) ION	H - 102
1o4t_A_93	1o4t	A	OXLOXALATE ION	H - 102
1od5_A_121	1od5	A	CO3CARBONATE ION	Y - 131
1od5_A_121	1od5	A	CO3CARBONATE ION	W - 132
1od5_A_121	1od5	A	CO3CARBONATE ION	T - 133
1qwr_A_153	1qwr	A	MSESELENOMETHIONINE	L - 153
1qwr_A_153	1qwr	A	ZNZINC ION	V - 167
1zxq_*_99	1zxq	*	NAGN-ACETYL-D-GLUCOSAMINE	F - 106
1zxq_*_99	1zxq	*	NAGN-ACETYL-D-GLUCOSAMINE	T - 107
2plt_*_18	2plt	*	CACALCIUM ION	T - 18

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1od5_A_121	1od5	A	AC1CO3 BINDING SITE FOR CHAIN A	Y - 131
1od5_A_121	1od5	A	AC1CO3 BINDING SITE FOR CHAIN A	T - 133
1uol_A_132	1uol	A	MUAMUTATION SITE FOR CHAIN A	L - 133

Clusters included in this Subclass

CLUSTER: AR.3.62

CLUSTER: AR.4.29

CLUSTER: AR.5.12

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