Information on SUBCLASS 3.8.4 |
Subclass Accession number: 3823
Subclass: 3.8.4 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 21.1 +/- 18.2 Average RMSD (Å) : 0.780 +/- 0.084 Consensus geometry
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Consensus Sequence: | hpXPpXh |
(φψ)-conformation: | bbppabb |
Pattern: | [gi] | [aet] | [fi] | [HSTWY] | [fkq] | [P] | [fty] | [FGKM] | [fivy] |
Conservation: | -0.689 | -0.215 | 0.034 | -0.238 | -0.409 | 2.608 | -0.266 | -0.550 | -0.274 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqs_A_160 | 1dqs | A | 165 | 173 | GAIWQPTKI | EEE---SEE | ebxbxxabb |
1ii5_A_85 | 1ii5 | A | 85 | 93 | ITFTQPYFS | EEE----EE | bbxxxxabb |
1noy_A_26 | 1noy | A | 30 | 38 | EVEYLPTMF | EEE---SEE | xbxbbxabb |
1pb7_A_135 | 1pb7 | A | 135 | 143 | IEFSKPFKY | EEE-S-SEE | bbbxxpabb |
1ujn_A_139 | 1ujn | A | 144 | 152 | GAFHFPQGV | EEE---SEE | bbxbxxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dqs_A_160 | 1dqs | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | K - 161 |
1dqs_A_160 | 1dqs | A | CRB[1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID | K - 161 |
1dqs_A_160 | 1dqs | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 162 |
1dqs_A_160 | 1dqs | A | CRB[1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID | N - 162 |
1ii5_A_85 | 1ii5 | A | GLUGLUTAMIC ACID | I - 96 |
1pb7_A_135 | 1pb7 | A | GLYGLYCINE | Q - 144 |
Clusters included in this Subclass |
CLUSTER: AR.3.135 |