Information on SUBCLASS 5.10.1 |
Subclass Accession number: 6814
Subclass: 5.10.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 11.5 +/- 13.7 Average RMSD (Å) : 0.883 +/- 0.194 Consensus geometry
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Consensus Sequence: | hphXXXXhX |
(φψ)-conformation: | bbppaaabb |
Pattern: | [FLMVY] | [dhnt] | [ILM] | [ANPS] | [ADPQ] | [ADER] | x | [filv] | x | [giwy] | x |
Conservation: | 0.587 | -0.535 | 2.428 | 0.248 | -0.297 | -0.112 | 0.026 | 0.006 | -1.344 | -1.209 | 0.203 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ems_A_304 | 1ems | A | 304 | 314 | FNIPADHIFYS | EE--GGGEEEE | xbxxaaaxabb |
1f4l_A_134 | 1f4l | A | 134 | 144 | MFLPDRFVKGT | EE--GGGEEEE | bxbxaaabbeb |
1fi4_A_34 | 1fi4 | A | 37 | 47 | VTLSQDDLRTL | EEB-TTTS-EE | bxxpaaabbbb |
1gd0_A_94 | 1gd0 | A | 99 | 108 | YDMNAANVGW. | EE--GGG-EE. | bxxxaaabxb. |
1k7w_A_273 | 1k7w | A | 273 | 283 | LTLSDAFSTGA | EE--GGG-EEE | bbxxaaabbbb |
1now_A_62 | 1now | A | 70 | 80 | LHLAPENFYIS | EE--GGG-EEE | bbbbaaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | S - 34 |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | I - 35 |
1fi4_A_34 | 1fi4 | A | MSESELENOMETHIONINE | V - 37 |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | N - 97 |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | Y - 99 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | T - 281 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | G - 282 |
1k7w_A_273 | 1k7w | A | AS1ARGININOSUCCINATE | A - 283 |
1now_A_62 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | M - 65 |
1now_A_62 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 66 |
1now_A_62 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | P - 67 |
1now_A_62 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 68 |
1now_A_62 | 1now | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 69 |
Clusters included in this Subclass |
CLUSTER: AR.5.52 |
CLUSTER: AR.6.21 |
CLUSTER: AR.6.45 |