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Information on SUBCLASS 5.27.1
Subclass Accession number: 4031
Subclass: 5.27.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 9.7 +/- 11.8
Average RMSD (Å) : 0.967 +/- 0.186

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: phphXXhhX
(φψ)-conformation: bbpaaapbb
Pattern: xx[dery][CFGV][KNRST][AGP][adk][dnstw][aflv][IMTV]x
Conservation:-0.271-0.878-0.222-0.4051.1571.358-0.645-0.467-0.5421.943-1.028
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b9m_A_2461b9m   A248258TAYFNADSVIIEEEE-GGG-EEbxbbxaaaxbx
1j48_A_401j48   A4050QDACNPATATSEEEE-TTT-EEbxbbxaaaxbb
1mdb_A_4231mdb   A424434VVEGRAKDQINEEEEEGGG-EEbxaexaaaxbb
1o89_A_1011o89   A101111QARVKGDWLVAEEEE-GGG-EEbbbbxaaaxbp
1rwr_A_2151rwr   A216226AIDGTAAGAMYEEEE-TT--EEabbbxaaaxbb
1s0y_A_401s0y   A4353IREGSGINFVEEEEE-GGG-EEbbbbxaaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b9m_A_2461b9m   A     MSESELENOMETHIONINE V - 247
1b9m_A_2461b9m   A     MSESELENOMETHIONINE T - 248
1b9m_A_2461b9m   A     MSESELENOMETHIONINE A - 249
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE V - 425
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE G - 427
1mdb_A_4231mdb   A     AMPADENOSINE MONOPHOSPHATE R - 428
1s0y_A_401s0y   A     MLAMALONIC ACID F - 40
1s0y_A_401s0y   A     MLAMALONIC ACID F - 51
1s0y_A_401s0y   A     MLAMALONIC ACID E - 53

Clusters included in this Subclass
CLUSTER: AR.4.168
CLUSTER: AR.5.113
CLUSTER: AR.6.88