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Information on SUBCLASS 5.4.1
Subclass Accession number: 6808
Subclass: 5.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 17.6 +/- 19.8
Average RMSD (Å) : 0.520 +/- 0.123

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: hppXhpKhX
(φψ)-conformation: abaappabb
Pattern: x[GILV][almv][dknst][DGKNQRT][adgknst][acftv][ADEKQR][KR][ILTV]x[EHPQR]
Conservation:-0.9280.436-0.197-0.377-0.335-0.713-0.8360.1722.6130.930-0.8470.081
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e94_A_251e94   A2536TVMKGNVKKVRREEEES----EEEbxabaaxxabbb
1g3k_A_251g3k   A2536TVMKGNARKVRREEEES----EEEbxabaaxbabbb
1iru_J_331iru   J3344QLVTTDFQKIFPEEEES----EEExxabaaxxabbx
1j2q_H_251j2q   H2536FIASKAAKKIYQEEEESS---EEExxabaaxxabbb
1ryp_2_251ryp   22536LLRFNGVERLIPEEEES----EEExxabaaxxabbw
1ryp_H_251ryp   H2536YIANRVTDKLTREEEESS---EEExxabaaxbaxbx
1ryp_I_251ryp   I2536IVADKNCAKLHREEEESS---EEExxabaaxbaxbx
1ryp_J_251ryp   J2536LGVSNKFEKIFHEEEES----EEExxabaaxxabbb
1ryp_K_251ryp   K2536SVLKDSDDKTRQEEEES----EEEbxabaaxbabbx
1ryp_L_251ryp   L2536WVASQTVKRVIEEEEES----EEExxabaaxxabxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE F - 25
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE A - 27
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE A - 31
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE K - 32
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE K - 33
1j2q_H_251j2q   H     CIB2-ACETYLAMINO-4-METHYL-PENTANOIC ACID [1-(1-FORMYL-PENTYLCARBAMOYL)-3-METHYL-BUTYL]-AMIDE Y - 35
1ryp_2_251ryp   2     MGMAGNESIUM ION L - 26
1ryp_I_251ryp   I     MGMAGNESIUM ION V - 26

Clusters included in this Subclass
CLUSTER: AR.4.18