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Information on SUBCLASS 5.5.2
Subclass Accession number: 1877
Subclass: 5.5.2 PSSM
Type: AR beta-beta link
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 50728 (>75 %)  50729 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 9.3 +/- 15.2
Average RMSD (Å) : 0.800 +/- 0.258

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXhXpXXph
(φψ)-conformation: bbpbaapbb
Pattern: xx[AFIV]x[KSY]xx[DEHT][GIL]
Conservation:0.240-0.4930.942-1.5091.333-0.580-0.8841.246-0.295
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fgu_A_3901fgu   A391399LSVLSSSTIEE--TT-EEbbxxaaxbb
1h80_A_3781h80   A385393ARFGYNADLEE--S-EEEbbxbaaxxb
1qqp_3_1981qqp   3203211ASAGKDFELEEE-TT-EEbbxxaaxbb
1vk6_A_31vk6   A311RIIEKLDHGEE--TT-EEbxxbaapbe
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1vk6_A_31vk6   A     MSESELENOMETHIONINE R - 3
1vk6_A_31vk6   A     MPD2-METHYL-2,4-PENTANEDIOL R - 3
1vk6_A_31vk6   A     MSESELENOMETHIONINE V - 15
1vk6_A_31vk6   A     MSESELENOMETHIONINE S - 16
1vk6_A_31vk6   A     MSESELENOMETHIONINE H - 17

Clusters included in this Subclass
CLUSTER: AR.4.193
CLUSTER: AR.5.89
CLUSTER: AR.6.36