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PDB code:

Information on SUBCLASS 8.1.1

Subclass Accession number: 6878 Subclass: 8.1.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 30 Average sequence ID (%) : 36.3 +/- 26.7 Average RMSD (Å) : 0.407 +/- 0.141 Consensus geometry d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ao5_A_20	1ao5	A	20	33	FNCEKNSQPWQVAV	EE--TTS-TTEEEE	bxpppvabaaxbbx
1aut_C_20	1aut	C	20	33	KMTRRGDSPWQVVL	EE--TTS-TTEEEE	xxxbpgabaaxbbx
1bio_*_20	1bio	-	20	33	REAEAHARPYMASV	EE--TTS-TTEEEE	bxxxpvabaaxbbx
1bru_P_20	1bru	P	20	33	EDARPNSWPWQVSL	EE--TTSSTTEEEE	bpxxpvabaaxbbx
1cgh_A_20	1cgh	A	20	33	RESRPHSRPYMAYL	EE--TTSSTTEEEE	bxxxwvabaaxbbb
1ddj_A_566	1ddj	A	566	579	CVAHPHSWPWQVSL	EE--TTSSTTEEEE	bxxxwvabaapbbx
1eax_A_20	1eax	A	20	33	TDADEGEWPWQVSL	EE--TTSSTTEEEE	bxxxxvabaaxbbb
1ekb_B_20	1ekb	B	20	33	SDSREGAWPWVVAL	EE--TTS-TTEEEE	bxxxpvabaaxbxb
1etr_H_20	1etr	H	20	33	QDAEVGLSPWQVML	EE--TTSSTTEEEE	bxxxxvabaaxbxx
1euf_A_20	1euf	A	20	33	HEAKPHSRPYMAFL	EE--TTS-TTEEEE	bxxxpvabaaxbbx
1f7z_A_20	1f7z	A	20	33	YTCQENSVPYQVSL	EE--TTS-TTEEEE	bxxxpvabaaxbbx
1fiz_A_20	1fiz	A	20	33	MSAEPGAWPWMVSL	EE--TTS-TTEEEE	bxbbpvabaaxbbx
1fni_A_20	1fni	A	20	33	YTCAANSIPYQVSL	EE--TTS-TTEEEE	bxpxxvabaaxbbx
1fuj_A_20	1fuj	A	20	33	HEAQPHSRPYMASL	EE--TTS-TTEEEE	bxxxwvabaaxbbx
1fxy_A_20	1fxy	A	20	33	YNCKDGEVPWQALL	EE--TTS-TTEEEE	bxpxpvabaaxbbx
1h4w_A_20	1h4w	A	20	33	YTCEENSLPYQVSL	EE--TTS-TTEEEE	bxxxplabaaxbbx
1h8d_H_20	1h8d	H	20	33	SDAEIGMSPWQVML	EE--TTS-TTEEEE	bxxxxvabaaxbxx
1iau_A_20	1iau	A	20	33	HEAKPHSRPYMAYL	EE--TTSSTTEEEE	bpxxwvabaaxbxb
1mza_A_20	1mza	A	20	33	KEVSPHSRPFMASI	EE--TTSSTTEEEE	bxxpwvabaaxbbx
1nn6_A_20	1nn6	A	20	33	TECKPHSRPYMAYL	EE--TTSSTTEEEE	bxxxpvabaaxbbb
1npm_A_20	1npm	A	20	33	RECIPHSQPWQAAL	EE--TTSSTTEEEE	bpxxwvabaaxbbx
1orf_A_20	1orf	A	20	33	NEVTPHSRPYMVLL	EE--TTSSTTEEEE	bppppvabaaxbxb
1os8_A_20	1os8	A	20	33	TRAAQGEFPFMVRL	EE--TTSSTTEEEE	bxxxxvabaaxbxb
1pfx_C_20	1pfx	C	20	33	ENAKPGQFPWQVLL	EE--TTS-TTEEEE	bxxxpvabaaxbxb
1ppf_E_20	1ppf	E	20	33	RRARPHAWPFMVSL	EE--TTSSTTEEEE	bpxxplabaaxbbb
1pq7_A_20	1pq7	A	20	33	TSASAGDFPFIVSI	EE--TTSSTTEEEE	bxxxpvabaaxbxb
1rfn_A_20	1rfn	A	20	33	EDAKPGQFPWQVVL	EE--TTSSTTEEEE	bxxxpvabaaxbbb
1trn_A_20	1trn	A	20	33	YNCEENSVPYQVSL	EE--TTS-TTEEEE	bxxpplabaaxbbb
2hlc_A_20	2hlc	A	20	33	YEAYTGLFPYQAGL	EE--TTTSTTEEEE	bxxbxgabaaxbbb
3rp2_A_20	3rp2	A	20	33	VESIPHSRPYMAHL	EE--TTS-TTEEEE	bpxxpvabaaxbxx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1euf_A_20	1euf	A	NAGN-ACETYL-D-GLUCOSAMINE	L - 34
1euf_A_20	1euf	A	NAGN-ACETYL-D-GLUCOSAMINE	F - 35
1euf_A_20	1euf	A	NAGN-ACETYL-D-GLUCOSAMINE	K - 36
1fni_A_20	1fni	A	EDO1,2-ETHANEDIOL	P - 28
1fuj_A_20	1fuj	A	NAGN-ACETYL-D-GLUCOSAMINE	R - 27
1fuj_A_20	1fuj	A	FUCFUCOSE	R - 27
1fuj_A_20	1fuj	A	FUCFUCOSE	Y - 29
1h8d_H_20	1h8d	H	TYSSULFONATED TYROSINE	K - 36
1iau_A_20	1iau	A	ZNZINC ION	H - 20
1iau_A_20	1iau	A	ZNZINC ION	E - 21
1iau_A_20	1iau	A	ZNZINC ION	A - 22
1iau_A_20	1iau	A	ZNZINC ION	P - 24
1iau_A_20	1iau	A	ZNZINC ION	H - 25
1iau_A_20	1iau	A	ZNZINC ION	R - 27
1iau_A_20	1iau	A	NAGN-ACETYL-D-GLUCOSAMINE	M - 34
1iau_A_20	1iau	A	NAGN-ACETYL-D-GLUCOSAMINE	I - 35
1iau_A_20	1iau	A	NAGN-ACETYL-D-GLUCOSAMINE	W - 36
1ppf_E_20	1ppf	E	NAGN-ACETYL-D-GLUCOSAMINE	R - 20
1ppf_E_20	1ppf	E	NAGN-ACETYL-D-GLUCOSAMINE	W - 27
1ppf_E_20	1ppf	E	FUCFUCOSE	W - 27

Clusters included in this Subclass

CLUSTER: AR.7.0

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