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Information on SUBCLASS 8.11.1
Subclass Accession number: 4200
Subclass: 8.11.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 24.1 +/- 26.7
Average RMSD (Å) : 1.278 +/- 0.268

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hpXpXXXhhXXh
(φψ)-conformation: bbaaabbpgpbb
Pattern: [CFILV][dety][FIV][DENQS][akmv][DEQST]x[ILT][AEPS][ACIP][AGW]x[dnprs][glvy][aciv]
Conservation:0.197-0.6461.3351.262-0.5570.600-1.2291.1120.069-0.4391.817-1.087-0.938-0.933-0.563
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1axi_B_931axi   B94108CYFNSSFTSIAIPYCEEE-GGG--SSSEEEbbbxaaabbxgxwbb
1dyz_A_921dyz   A95109VTFDVSKIAAGENYAEEEEGGGS-TT--EEbbbxaaabbxgxbbb
1f6f_B_611f6f   B6276CFFSKQYTSIWKIYIEEE-TTT--SS-EEEbbbxaaabbbvbxbb
1feu_A_1371feu   A137151IEVDVSGLEIGDSLHEEEE-TT--TTEEEEbxbxaaapbpgxbxb
1ojj_A_1281ojj   A131145FDVDATKLPCGMNSAEEEE-TT--TT-EEEbbbbaaabxpgxbxb
1ore_A_1071ore   A110124LEIQKDALEPGQRVVEEEETTSS-TT-EEEbbbxaaabxpvxbbb
1q2b_A_1251q2b   A129143FDVDVSQLPCGLNGAEEEE-TT--TTEEEEbbbbaaabxpvbbxb
1rkr_A_921rkr   A95109VTFDVSKLAAGEDYAEEEEGGG--TTS-EEbbbxaaabbxgxbbb
3ovw_A_1263ovw   A129143FDVEMEKLPCGMNGAEEEE-TT--TTEEEEbxbbaaabxpvxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1feu_A_1371feu   A     CDCADMIUM ION S - 149
1feu_A_1371feu   A     CDCADMIUM ION L - 150
1feu_A_1371feu   A     CDCADMIUM ION H - 151
1ojj_A_1281ojj   A     GLCGLUCOSE N - 143
1ojj_A_1281ojj   A     GLCGLUCOSE A - 145
1ojj_A_1281ojj   A     GALD-GALACTOSE A - 145
1ojj_A_1281ojj   A     GLCGLUCOSE L - 146
1ojj_A_1281ojj   A     GLCGLUCOSE Y - 147
1ojj_A_1281ojj   A     GALD-GALACTOSE Y - 147
1ojj_A_1281ojj   A     GLCGLUCOSE L - 148
1ojj_A_1281ojj   A     GLCGLUCOSE S - 149
1ore_A_1071ore   A     AMPADENOSINE MONOPHOSPHATE A - 108
1ore_A_1071ore   A     AMPADENOSINE MONOPHOSPHATE D - 127
1ore_A_1071ore   A     AMPADENOSINE MONOPHOSPHATE D - 128
1ore_A_1071ore   A     AMPADENOSINE MONOPHOSPHATE L - 129
1ore_A_1071ore   A     AMPADENOSINE MONOPHOSPHATE L - 130
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ojj_A_1281ojj   A AC2GLC BINDING SITE FOR CHAIN AN - 143
1ojj_A_1281ojj   A AC2GLC BINDING SITE FOR CHAIN AA - 145
1ojj_A_1281ojj   A AC3GAL BINDING SITE FOR CHAIN AY - 147

Clusters included in this Subclass
CLUSTER: AR.6.218
CLUSTER: AR.8.19