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Information on SUBCLASS 0.1.12
Subclass Accession number: 870
Subclass: 0.1.12 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 7.8 +/- 13.3
Average RMSD (Å) : 0.421 +/- 0.125

Consensus geometry
d (Å): 3 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XpXX
(φψ)-conformation: bbaa
Pattern: x[ehnprs]xxx[ailmpvy]x
Conservation:-0.4761.824-0.296-0.538-0.2880.877-1.103
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1doi_*_21doi   -612LNYEVVDEEHHHHHbxaaaaa
1e6u_A_2111e6u   A212218LHVDDMAEEHHHHHbxaaaaa
1fp3_A_1761fp3   A177183ESMAVPMEETHHHHxxaaaaa
1jm1_A_591jm1   A6268ANIQQVQEEHHHHHbxaaaaa
1kzy_C_18251kzy   C18261832VSHVWVHEETHHHHbxaaaaa
1m7v_A_2351m7v   A235241YMGTEIGEEHHHHHxbaaaaa
1ogc_A_641ogc   A6975AAAEIKAEETHHHHbxaaaaa
1q35_A_1921q35   A195201GNSYYYGEETHHHHbxaaaaa
1qg8_A_1621qg8   A164170HRYSVLEEETHHHHbxaaaaa
1r9l_A_2341r9l   A240246ANKAWAEEEHHHHHbpaaaaa
1rkx_A_2331rkx   A233239QHVLEPLEETHHHHbxaaaaa
1sgp_E_2231sgp   E229235QPVTEALEEHHHHHxxaaaaa
1t15_A_17121t15   A17141720VSYFWVTEETHHHHbxaaaaa
1uu3_A_1071uu3   A113119LEKRHIIEEHHHHHbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6u_A_2111e6u   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 217
1m7v_A_2351m7v   A     ARGARGININE Y - 235
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 235
1m7v_A_2351m7v   A     ARGARGININE M - 236
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 236
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 238
1m7v_A_2351m7v   A     ARGARGININE E - 239
1m7v_A_2351m7v   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 239
1m7v_A_2351m7v   A     ARGARGININE I - 240
1q35_A_1921q35   A     FMTFORMIC ACID N - 196
1q35_A_1921q35   A     FMTFORMIC ACID Y - 198
1q35_A_1921q35   A     FMTFORMIC ACID Y - 199
1rkx_A_2331rkx   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 242
1uu3_A_1071uu3   A     GOLGLYCEROL E - 107
1uu3_A_1071uu3   A     GOLGLYCEROL Y - 108
1uu3_A_1071uu3   A     GOLGLYCEROL A - 109
1uu3_A_1071uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE A - 109
1uu3_A_1071uu3   A     GOLGLYCEROL K - 111
1uu3_A_1071uu3   A     LY4(9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H] [1,4,13]OXADIAZACYCLOHEXADECINE-18,20-DIONE K - 111
1uu3_A_1071uu3   A     GOLGLYCEROL I - 112
1uu3_A_1071uu3   A     GOLGLYCEROL L - 113
1uu3_A_1071uu3   A     GOLGLYCEROL I - 118
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1uu3_A_1071uu3   A AC1LY4 BINDING SITE FOR CHAIN AA - 109
1uu3_A_1071uu3   A AC1LY4 BINDING SITE FOR CHAIN AK - 111

Clusters included in this Subclass
CLUSTER: EH.0.20