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Information on SUBCLASS 1.1.12
Subclass Accession number: 2641
Subclass: 1.1.12 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 35

Average sequence ID (%) : 10.9 +/- 14.9
Average RMSD (Å) : 0.566 +/- 0.181

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XhpXp
(φψ)-conformation: bbpaa
Pattern: xx[filtvy][deknpqrst]x[adekrst][adenqrst]xxxx
Conservation:0.504-1.3631.2950.512-0.8291.0401.432-1.120-0.807-0.345-0.319
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aye_*_521aye   -5464VRVPFVNVQAVEEE-GGGHHHHbxbwaaaaaaa
1b24_A_1601b24   A163173LNISLRDRIKFEEE-GGGHHHHbbxpaaaaaaa
1dug_A_281dug   A3040HLYERDEGDKWEEE-TT-HHHHbxxxaaaaaaa
1eo9_A_1391eo9   A142152RVYFDDEAEANEEEEGGGHHHHbbbbaaaaaaa
1f4p_A_661f4p   A6675.ELQDDFIPLF.EE-TTTHHHH.bxpaaaaaaa
1fi4_A_3071fi4   A309319LYYLAENESKLEEE-GGGHHHHbxbxaaaaaaa
1gne_*_281gne   -3040HLYERDEGDKWEEE-TTTHHHHbbxbaaaaaaa
1gx5_A_4501gx5   A452462YSIEPLDLPQIEEE-GGGHHHHxbbxaaaaaaa
1gyx_A_401gyx   A4454QQIQPESWQAIEE--GGGHHHHbxbxaaaaaaa
1h2k_A_2141h2k   A217227ILFPPDQFECLEEE-GGGHHHHbbbxaaaaaaa
1inl_A_651inl   A6676TMTTEKDEFMYEEEETTTHHHHxabbaaaaaaa
1iq8_A_5091iq8   A510520VVVNKEAEPFAEEE-TTTHHHHbxbxaaaaaaa
1iy9_A_511iy9   A5262VMTSEKDEFVYEEEETTTHHHHxabbaaaaaaa
1iyh_A_301iyh   A3242HRIEQADWPEIEEE-GGGHHHHxbxbaaaaaaa
1jj2_O_211jj2   O2131VWFNPERQGDIEEE-GGGHHHHxbbpaaaaaaa
1jqn_A_6081jqn   A610620VTEQGEMIRFKEEE-GGGHHHHbxxxaaaaaaa
1kol_A_3641kol   A365375QVISLDDAPRGEEE-GGGHHHHbxbxaaaaaaa
1l5j_A_4101l5j   A411421VGSQDTTGPMTEEE-TTTHHHHbbbbaaaaaaa
1llu_A_3141llu   A315325HPGKLDDINQIEEE-GGGHHHHbwbbaaaaaaa
1m0u_A_761m0u   A7888VRVTRDEWPALEEE-TTTHHHHxbxxaaaaaaa
1m44_A_1131m44   A116126LSSSARARRLYEE--TTTHHHHbbbxaaaaaaa
1nth_A_1341nth   A134143.PISEDVFMPV.EE-GGGHHHH.wbxaaaaaaa
1o59_A_31o59   A312.FFSLADEAEF.EE-GGGHHHH.bbpaaaaaaa
1o89_A_2961o89   A296306KEISLSEAPNFEEE-GGGHHHHxxbxaaaaaaa
1ovn_A_281ovn   A2838VDLDELSFEKTEEE-TTTHHHHbxbbaaaaaaa
1pca_*_521pca   -5464VRVPFPSIQAVEEE-GGGHHHHbxbxaaaaaaa
1pd2_1_301pd2   13242HRIEQADWPKIEEE-TTTHHHHxbbxaaaaaaa
1pjr_*_1891pjr   -189198.SLDFDDLIMT.EE-TTHHHHH.bbxaaaaaaa
1t7p_A_301t7p   A3242VSYRPSDFGAYEEE-GGGHHHHbxbxaaaaaaa
1uir_A_521uir   A5363VQSTERDEYIYEEEETTTHHHHxabbaaaaaaa
1uoc_A_171uoc   A1727RDVWKSNLYSEEEE-TTTHHHHxxbbaaaaaaa
1uuf_A_3161uuf   A317327EMIRADQINEAEEE-GGGHHHHbxbxaaaaaaa
2fhe_A_272fhe   A3040QIYERDDGEKWEEE-TT-HHHHxxbxaaaaaaa
2pva_A_982pva   A98108TGINPVYVISQEEE-GGGHHHHbxbxaaaaaaa
3pcc_A_1393pcc   A142152RLYFDDEAQANEEEETT-HHHHbbbbaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dug_A_281dug   A     GSHGLUTHATHIONE W - 40
1dug_A_281dug   A     GSHGLUTHATHIONE R - 41
1f4p_A_661f4p   A     FMNFLAVIN MONONUCLEOTIDE Q - 68
1fi4_A_3071fi4   A     MSESELENOMETHIONINE Y - 310
1fi4_A_3071fi4   A     MSESELENOMETHIONINE Y - 311
1fi4_A_3071fi4   A     MSESELENOMETHIONINE L - 312
1fi4_A_3071fi4   A     MSESELENOMETHIONINE A - 313
1gx5_A_4501gx5   A     MSESELENOMETHIONINE I - 463
1gx5_A_4501gx5   A     MSESELENOMETHIONINE L - 466
1gx5_A_4501gx5   A     MSESELENOMETHIONINE H - 467
1gyx_A_401gyx   A     BEZBENZOIC ACID W - 51
1h2k_A_2141h2k   A     OGAN-OXALYOLGLYCINE K - 214
1iyh_A_301iyh   A     GSHGLUTHATHIONE W - 39
1iyh_A_301iyh   A     GSHGLUTHATHIONE K - 43
1jqn_A_6081jqn   A     DCO3,3-DICHLORO-2-PHOSPHONOMETHYL-ACRYLIC ACID T - 611
1jqn_A_6081jqn   A     ASPASPARTIC ACID M - 616
1kol_A_3641kol   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 379
1l5j_A_4101l5j   A     TRAACONITATE ION Q - 414
1l5j_A_4101l5j   A     TRAACONITATE ION D - 415
1l5j_A_4101l5j   A     TRAACONITATE ION T - 416
1l5j_A_4101l5j   A     TRAACONITATE ION T - 417
1llu_A_3141llu   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 329
1llu_A_3141llu   A     EDO1,2-ETHANEDIOL R - 330
1m0u_A_761m0u   A     GTTGLUTATHIONE W - 85
1o59_A_31o59   A     MSESELENOMETHIONINE F - 3
1pca_*_521pca   *     CITCITRIC ACID L - 68
1pca_*_521pca   *     CITCITRIC ACID A - 70
1pd2_1_301pd2   1     GTTGLUTATHIONE W - 39
1uoc_A_171uoc   A     CACALCIUM ION R - 32
1uoc_A_171uoc   A     CACALCIUM ION Q - 33
1uoc_A_171uoc   A     CACALCIUM ION L - 34
2pva_A_982pva   A     DTDDITHIANE DIOL V - 103
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gyx_A_401gyx   A AC2BEZ BINDING SITE FOR CHAIN AW - 51
1uoc_A_171uoc   A AC1ENVIRONMENT FOR CA IN CHAIN AQ - 33

Clusters included in this Subclass
CLUSTER: EH.3.45
CLUSTER: EH.3.52
CLUSTER: EH.4.248
CLUSTER: EH.4.25
CLUSTER: EH.5.12