Information on SUBCLASS 1.1.48 |
Subclass Accession number: 2677
Subclass: 1.1.48 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.6 +/- 12.2 Average RMSD (Å) : 0.600 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXXXX |
(φψ)-conformation: | bbpaa |
Pattern: | x | [EKS] | [RW] | x | [ACV] | [AFI] | [FV] | [KV] | x | [ADT] | [AEP] | [AE] | [DEK] | x | [EK] | [ER] | x | x | x | [CDE] | [ILV] | x |
Conservation: | -1.060 | 0.409 | 0.802 | -1.060 | 0.276 | -0.659 | 0.665 | 0.307 | -0.526 | -0.526 | -0.392 | 0.854 | 0.943 | -1.060 | 2.095 | 1.548 | -1.060 | -1.194 | -1.327 | -0.392 | 1.478 | -0.121 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j5y_A_71 | 1j5y | A | 71 | 92 | VSRLVAVKHAPEEIKEELLCVV | EEEEEEEE--GGGHHHHHHHHH | bbbxbxbbbxaaaaaaaaaaaa |
1kr4_A_50 | 1kr4 | A | 55 | 76 | KEWAAIFKTTEEKEKELYEELR | EEEEEEEE--GGGHHHHHHHHH | bbbxbbbbbbaaaaaaaaaaaa |
2dap_*_193 | 2dap | - | 193 | 214 | HKRQCFVVADAADHERIENDIR | EEEEEEEE--TTSHHHHHHHHH | bbbbbbbbbxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | V - 71 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | S - 72 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | R - 73 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | L - 74 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | V - 75 |
1j5y_A_71 | 1j5y | A | NINICKEL (II) ION | V - 77 |
1j5y_A_71 | 1j5y | A | NINICKEL (II) ION | H - 79 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | P - 81 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | I - 84 |
1j5y_A_71 | 1j5y | A | NINICKEL (II) ION | I - 84 |
1j5y_A_71 | 1j5y | A | MSESELENOMETHIONINE | K - 85 |
1j5y_A_71 | 1j5y | A | NINICKEL (II) ION | E - 87 |
1j5y_A_71 | 1j5y | A | NINICKEL (II) ION | L - 88 |
1kr4_A_50 | 1kr4 | A | MSESELENOMETHIONINE | K - 62 |
1kr4_A_50 | 1kr4 | A | MSESELENOMETHIONINE | T - 63 |
1kr4_A_50 | 1kr4 | A | MSESELENOMETHIONINE | T - 64 |
1kr4_A_50 | 1kr4 | A | MSESELENOMETHIONINE | E - 65 |
2dap_*_193 | 2dap | * | API2,6-DIAMINOPIMELIC ACID | R - 195 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2dap_*_193 | 2dap | * | DAPDIAMINOPIMELATE BINDING SITE. | R - 195 |
Clusters included in this Subclass |
CLUSTER: EH.6.298 |